Structure of PDB 2aq4 Chain A Binding Site BS02
Receptor Information
>2aq4 Chain A (length=428) Species:
4932
(Saccharomyces cerevisiae) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KRIVACDDPDFLTSYFAHSRLHHLSAWKANLKDKFLNENIHKYTKITDKD
TYIIFHIDFDCFFATVAYLCRSSSFSACDFKRDPIVVCHGTKNSDIASCN
YVARSYGIKNGMWVSQAEKMLPNGIKLISLPYTFEQFQLKSEAFYSTLKR
LNIFNLILPISIDEAVCVRIIPDTLNARLCEEIRQEIFQGTNGCTVSIGC
SDSLVLARLALKMAKPNGYNITFKSNLSEEFWSSFKLDDLPGVGHSTLSR
LESTFDSPHSLNDLRKRYTLDALKASVGSKLGMKIHLALQGQDDEESLKI
LYDPKEVLQRKSLSIDINWGIRFKNITQVDLFIERGCQYLLEKLNEINKT
TSQITLKLMRRCKDAPIEPPKYMGMGRCDSFSRSSRLGIPTNEFGIIATE
MKSLYRTLGCPPMELRGLALQFNKLVDV
Ligand information
>2aq4 Chain T (length=16) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
taaggtaggggaggat
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2aq4
Rev1 employs a novel mechanism of DNA synthesis using a protein template.
Resolution
2.32 Å
Binding residue
(original residue number in PDB)
I307 Y319 F320 H322 S323 R324 L325 H326 S329 K336 H393 G394 T395 K396 N397 S398 D399 S589 K590 E606 R620 K621 L623 S624 I625 D626 N628 W629 K681 Y682 G684 M685 G686
Binding residue
(residue number reindexed from 1)
I3 Y15 F16 H18 S19 R20 L21 H22 S25 K32 H89 G90 T91 K92 N93 S94 D95 S279 K280 E296 R310 K311 L313 S314 I315 D316 N318 W319 K371 Y372 G374 M375 G376
Enzymatic activity
Enzyme Commision number
2.7.7.-
Gene Ontology
Molecular Function
GO:0003684
damaged DNA binding
GO:0003887
DNA-directed DNA polymerase activity
Biological Process
GO:0006281
DNA repair
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:2aq4
,
PDBe:2aq4
,
PDBj:2aq4
PDBsum
2aq4
PubMed
16195463
UniProt
P12689
|REV1_YEAST DNA repair protein REV1 (Gene Name=REV1)
[
Back to BioLiP
]