Structure of PDB 1zh5 Chain A Binding Site BS02
Receptor Information
>1zh5 Chain A (length=185) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIK
FNRLNRLTTDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEY
KNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSI
FVVFDSIESAKKFVETPGQKYKETDLLILFKDDYF
Ligand information
>1zh5 Chain D (length=9) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ugcuguuuu
.........
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1zh5
Structural Basis for Recognition and Sequestration of UUU(OH) 3' Temini of Nascent RNA Polymerase III Transcripts by La, a Rheumatic Disease Autoantigen.
Resolution
1.85 Å
Binding residue
(original residue number in PDB)
Y23 Y24 D33 F55 N56 R57 I140
Binding residue
(residue number reindexed from 1)
Y19 Y20 D29 F51 N52 R53 I136
Binding affinity
PDBbind-CN
: Kd=7nM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003676
nucleic acid binding
GO:0003723
RNA binding
Biological Process
GO:0006396
RNA processing
Cellular Component
GO:0005634
nucleus
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1zh5
,
PDBe:1zh5
,
PDBj:1zh5
PDBsum
1zh5
PubMed
16387655
UniProt
P05455
|LA_HUMAN Lupus La protein (Gene Name=SSB)
[
Back to BioLiP
]