Structure of PDB 1z45 Chain A Binding Site BS02
Receptor Information
>1z45 Chain A (length=674) Species:
4932
(Saccharomyces cerevisiae) [
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SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK
HHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHN
NILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPT
NPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLG
IPNNLLPYMAQVAVGRREKLYIFRDGTPIRDYIHVVDLAKGHIAALQYLE
AYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYVLNLTAKPDRA
KRELKWQTELQVEDSCKDLWKWTTENPFGYQLRGVEARFSAEDMRYDARF
VTIGAGTRFQATFANLGASIVDLKVNGQSVVLGYENEEGYLNPDSAYIGA
TIGRYANRISKGKFSLCNKDYQLTVNNGVNANHSSIGSFHRKRFLGPIIQ
NPSKDVFTAEYMLIDNEKDTEFPGDLLVTIQYTVNVAQKSLEIVYKGKLT
AGEATPINLTNHSYFNLNKPYGDTIEGTEIMVRSKKSVDVDKNMIPTGNI
VDREIATFNSTKPTVLGPKNPQFDCCFVVDENAKPSQINTLNNELTLIVK
AFHPDSNITLEVLSTEPTYQFYTGDFLSAGYEARQGFAIEPGRYIDAINQ
ENWKDCVTLKNGETYGSKIVYRFS
Ligand information
Ligand ID
NAD
InChI
InChI=1S/C21H27N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1-4,7-8,10-11,13-16,20-21,29-32H,5-6H2,(H5-,22,23,24,25,33,34,35,36,37)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
BAWFJGJZGIEFAR-NNYOXOHSSA-N
SMILES
Software
SMILES
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
Formula
C21 H27 N7 O14 P2
Name
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
ChEMBL
CHEMBL1234613
DrugBank
DB14128
ZINC
PDB chain
1z45 Chain A Residue 703 [
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Receptor-Ligand Complex Structure
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PDB
1z45
The molecular architecture of galactose mutarotase/UDP-galactose 4-epimerase from Saccharomyces cerevisiae.
Resolution
1.85 Å
Binding residue
(original residue number in PDB)
G18 G21 Y22 I23 D42 N43 L44 S45 N46 S47 D69 L70 F91 A92 G93 K95 N110 S133 S134 S135 Y163 K167 Y192 P195
Binding residue
(residue number reindexed from 1)
G8 G11 Y12 I13 D32 N33 L34 S35 N36 S37 D59 L60 F81 A82 G83 K85 N100 S123 S124 S125 Y153 K157 Y182 P185
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
S135 A136 T137 Y163 K167 H458 H537 E665
Catalytic site (residue number reindexed from 1)
S125 A126 T127 Y153 K157 H433 H512 E640
Enzyme Commision number
5.1.3.2
: UDP-glucose 4-epimerase.
5.1.3.3
: aldose 1-epimerase.
Gene Ontology
Molecular Function
GO:0003824
catalytic activity
GO:0003978
UDP-glucose 4-epimerase activity
GO:0004034
aldose 1-epimerase activity
GO:0016853
isomerase activity
GO:0030246
carbohydrate binding
Biological Process
GO:0005975
carbohydrate metabolic process
GO:0006012
galactose metabolic process
GO:0019318
hexose metabolic process
GO:0033499
galactose catabolic process via UDP-galactose
Cellular Component
GO:0005829
cytosol
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1z45
,
PDBe:1z45
,
PDBj:1z45
PDBsum
1z45
PubMed
15795221
UniProt
P04397
|GAL10_YEAST Bifunctional protein GAL10 (Gene Name=GAL10)
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