Structure of PDB 1yd4 Chain A Binding Site BS02

Receptor Information
>1yd4 Chain A (length=89) Species: 2336 (Thermotoga maritima) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKEKIRKKILLAPEEPGVYIFKNKGVPIFIGKAKRLSNRLRSYLNPQTEK
VFRIGEEADELETIVVMNEREAFILEANLIKKYRPKYNV
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain1yd4 Chain A Residue 1004 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1yd4 Structural insights into the first incision reaction during nucleotide excision repair
Resolution1.9 Å
Binding residue
(original residue number in PDB)		E60 E62
Binding residue
(residue number reindexed from 1)		E60 E62
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0006289 nucleotide-excision repair

View graph for
Biological Process
External links
PDB RCSB:1yd4, PDBe:1yd4, PDBj:1yd4
PDBsum1yd4
PubMed15692561
UniProtQ9WYA3|UVRC_THEMA UvrABC system protein C (Gene Name=uvrC)

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