Structure of PDB 1y7p Chain A Binding Site BS02

Receptor Information
>1y7p Chain A (length=212) Species: 2234 (Archaeoglobus fulgidus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LRGLRIIAENKIGVLRDLTTIIANITFAQTFLIKHGEHEGKALIYFEIEG
GDFEKILERVKTFDYIIEIEEEESFERVFGKRVIILGGGALVSQVAIGAI
SEADRHNLRGERISVDTMPVVGEEEIAEAVKAVSRLHRAEVLVLAGGIMG
GKITEEVKKLRKSGIRVISLSMFGSVPDVADVVISDPVMAGTLAVMHISE
KAKFDLDRVKGR
Ligand information
Ligand IDRIP
InChIInChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2/t2-,3-,4-,5-/m1/s1
InChIKeySRBFZHDQGSBBOR-TXICZTDVSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C1C(C(C(C(O1)O)O)O)O
OpenEye OEToolkits 1.5.0C1[C@H]([C@H]([C@H]([C@@H](O1)O)O)O)O
CACTVS 3.341O[CH]1CO[CH](O)[CH](O)[CH]1O
CACTVS 3.341O[C@@H]1CO[C@@H](O)[C@H](O)[C@@H]1O
ACDLabs 10.04OC1C(O)COC(O)C1O
FormulaC5 H10 O5
Namebeta-D-ribopyranose;
beta-D-ribose;
D-ribose;
ribose;
RIBOSE(PYRANOSE FORM)
ChEMBLCHEMBL1159662
DrugBankDB04286
ZINCZINC000004097544
PDB chain1y7p Chain C Residue 4181 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1y7p 1.9A crystal structure of a hypothetical protein AF1403 from Archaeoglobus fulgidus
Resolution1.9 Å
Binding residue
(original residue number in PDB)		R87 I89 D121 L141
Binding residue
(residue number reindexed from 1)		R82 I84 D116 L136
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:1y7p, PDBe:1y7p, PDBj:1y7p
PDBsum1y7p
PubMed
UniProtO28869|Y1403_ARCFU Uncharacterized protein AF_1403 (Gene Name=AF_1403)

[Back to BioLiP]