Structure of PDB 1wet Chain A Binding Site BS02
Receptor Information
>1wet Chain A (length=338) Species:
562
(Escherichia coli) [
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TIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVAR
SLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLE
KQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKA
DFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMK
AMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAM
GALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAF
NMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYR
Ligand information
Ligand ID
GUN
InChI
InChI=1S/C5H5N5O/c6-5-9-3-2(4(11)10-5)7-1-8-3/h1H,(H4,6,7,8,9,10,11)
InChIKey
UYTPUPDQBNUYGX-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
NC1=Nc2[nH]cnc2C(=O)N1
ACDLabs 10.04
O=C1c2ncnc2N=C(N1)N
OpenEye OEToolkits 1.5.0
c1[nH]c2c(n1)C(=O)NC(=N2)N
Formula
C5 H5 N5 O
Name
GUANINE
ChEMBL
CHEMBL219568
DrugBank
DB02377
ZINC
ZINC000000895129
PDB chain
1wet Chain A Residue 599 [
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Receptor-Ligand Complex Structure
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PDB
1wet
The X-ray structure of the PurR-guanine-purF operator complex reveals the contributions of complementary electrostatic surfaces and a water-mediated hydrogen bond to corepressor specificity and binding affinity.
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
Y73 F74 R190 T192 R196 F221 D275
Binding residue
(residue number reindexed from 1)
Y71 F72 R188 T190 R194 F219 D273
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000976
transcription cis-regulatory region binding
GO:0001217
DNA-binding transcription repressor activity
GO:0002057
guanine binding
GO:0003677
DNA binding
GO:0003700
DNA-binding transcription factor activity
GO:0005515
protein binding
GO:0042803
protein homodimerization activity
Biological Process
GO:0006164
purine nucleotide biosynthetic process
GO:0006355
regulation of DNA-templated transcription
GO:0045892
negative regulation of DNA-templated transcription
GO:1900372
negative regulation of purine nucleotide biosynthetic process
Cellular Component
GO:0005829
cytosol
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:1wet
,
PDBe:1wet
,
PDBj:1wet
PDBsum
1wet
PubMed
9278422
UniProt
P0ACP7
|PURR_ECOLI HTH-type transcriptional repressor PurR (Gene Name=purR)
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