Structure of PDB 1vto Chain A Binding Site BS02

Receptor Information

>1vto Chain A (length=187) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

VDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVI
MRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFK
DFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIV
LLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKI

Ligand information

>1vto Chain D (length=14) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

tgcccttttatagc

Receptor-Ligand Complex Structure

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Structure summary

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PDB	1vto 1.9 A Resolution Refined Structure of TBP Recognizing the Minor Groove of TATAAAAG
Resolution	1.9 Å
Binding residue (original residue number in PDB)	Q26 N27 R56 F57 R63 T70 T82 V119 F148 P149 F165 S167 K169 V171
Binding residue (residue number reindexed from 1)	Q15 N16 R45 F46 R52 T59 T71 V108 F137 P138 F154 S156 K158 V160

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0003677	DNA binding
GO:0005515	protein binding

	Biological Process
GO:0006352	DNA-templated transcription initiation

	Cellular Component
GO:0005634	nucleus

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Cellular Component

External links

PDB	RCSB:1vto, PDBe:1vto, PDBj:1vto
PDBsum	1vto
PubMed	7634103
UniProt	P28147\|TBP1_ARATH TATA-box-binding protein 1 (Gene Name=TBP1)

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