Structure of PDB 1vko Chain A Binding Site BS02

Receptor Information
>1vko Chain A (length=511) Species: 6239 (Caenorhabditis elegans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KRLIVESPNVKLEDGVLESRFTYRKNHFEHRADGLHVTPKEHDYSFKTVL
KPRKTGLLLVGLGGNNGSTAVGSIFANQYAMTWRTKEGHSQANYFGSVTQ
TATVHLGYDSATQNQIFVPFKDIVPILSPNDLIISGWDISDSNLYEAMGR
AKVFEPELQEKLRPFMEPIVPLPSIYYPDFIASNQGDRANNVIPGDNKLE
HLEHIRADIRKFKQEHELECVIVLWTANTERYTDVRQGLNATADEIMESI
RVNEDEVSPSNIFAVASILEGAHYINGSPQNTLVPGLIELAERHKVFVGG
DDFKSGQTKFKSAFVDFLVSSGMKPESIVSYNHLGNNDGKNLSEARQFRS
KEISKSSVVDDMVKSNQILFPDAKNPDYCVVIKYVPYVADSKRAMDEYIC
SIFMGGKQTFVVHNTCEDSLLASPLIYDLAILTELASRVSYKVDDEYKPF
HSVLSILSLLLKAPVVPPGTPISNAFMRQFSTLTKLVTALAGFPSDTDMQ
IEFFTQLPAAK
Ligand information
Ligand IDPOP
InChIInChI=1S/H4O7P2/c1-8(2,3)7-9(4,5)6/h(H2,1,2,3)(H2,4,5,6)/p-2
InChIKeyXPPKVPWEQAFLFU-UHFFFAOYSA-L
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0O[P@@](=O)([O-])O[P@@](=O)(O)[O-]
CACTVS 3.341O[P]([O-])(=O)O[P](O)([O-])=O
ACDLabs 10.04[O-]P(=O)(O)OP([O-])(=O)O
OpenEye OEToolkits 1.5.0OP(=O)([O-])OP(=O)(O)[O-]
FormulaH2 O7 P2
NamePYROPHOSPHATE 2-
ChEMBL
DrugBank
ZINC
PDB chain1vko Chain A Residue 602 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1vko Crystal structure of inositol-3-phosphate synthase (ce21227) from Caenorhabditis elegans at 2.30 A resolution
Resolution2.3 Å
Binding residue
(original residue number in PDB)		S315 G316 Q317 T318 K361 K365 K402 K472
Binding residue
(residue number reindexed from 1)		S305 G306 Q307 T308 K351 K355 K392 K462
Annotation score1
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Fri Nov 29 02:34:52 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '1vko', asym_id = 'A', bs = 'BS02', title = 'Crystal structure of inositol-3-phosphate syntha... from Caenorhabditis elegans at 2.30 A resolution'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='1vko', asym_id='A', bs='BS02', title='Crystal structure of inositol-3-phosphate syntha... from Caenorhabditis elegans at 2.30 A resolution')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0004512,0006021,0008654', uniprot = '', pdbid = '1vko', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0004512,0006021,0008654', uniprot='', pdbid='1vko', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>