Structure of PDB 1ph3 Chain A Binding Site BS02
Receptor Information
>1ph3 Chain A (length=460) Species:
200597
(Sterkiella nova) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
YEYVELAKASLTSAQPQHFYAVVIDATFPYKTNQERYICSLKIVDPTLYL
KQQKGAGDASDYATLVLYAKRFEDLPIIHRAGDIIRVHRATLRLYNGQRQ
FNANVFYSSSWALFSTDKRSVTQEINNQDAVSDTTPFSFSSKHATIEKNE
ISILQNLRKWANQYFSSYSVISSDMYTALNKAQAQKGDFDVVAKILQVHE
LDEYTNELKLKDASGQVFYTLSLKLKFPHVRTGEVVRIRSATYDETSTQK
KVLILSHYSNIITFIQSSKLAKELRAKIQDDHSVEVASLKKNVSLNAVVL
TEVDKKHAALPSTSLQDLFHHADSDKELQAQDTFRTQFYVTKIEPSDVKE
WVKGYDRKTKKSSSLKGASGKGDNIFQVQFLVKDASTQLNNNTYRVLLYT
QDGLGANFFNVKADNLHKNADARKKLEDSAELLTKFNSYVDAVVERRNGF
YLIKDTKLIY
Ligand information
>1ph3 Chain D (length=12) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ggggttttggtg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1ph3
Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes
Resolution
2.3 Å
Binding residue
(original residue number in PDB)
F63 Y65 K66 Y72 S75 K77 V101 F107 Y130 Q135 D223 D225 Y239 T240 L260 K261 R274 S275 S291 H292 Y293
Binding residue
(residue number reindexed from 1)
F28 Y30 K31 Y37 S40 K42 V66 F72 Y95 Q100 D188 D190 Y204 T205 L225 K226 R239 S240 S256 H257 Y258
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0005515
protein binding
GO:0010521
telomerase inhibitor activity
GO:0043047
single-stranded telomeric DNA binding
GO:0098505
G-rich strand telomeric DNA binding
Biological Process
GO:0000723
telomere maintenance
GO:0016233
telomere capping
GO:0032210
regulation of telomere maintenance via telomerase
Cellular Component
GO:0000781
chromosome, telomeric region
GO:0000782
telomere cap complex
GO:0000783
nuclear telomere cap complex
GO:0005634
nucleus
GO:0005694
chromosome
GO:0032991
protein-containing complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1ph3
,
PDBe:1ph3
,
PDBj:1ph3
PDBsum
1ph3
PubMed
12912928
UniProt
P29549
|TEBA_STENO Telomere-binding protein subunit alpha (Gene Name=MAC-56A)
[
Back to BioLiP
]