Structure of PDB 1ma7 Chain A Binding Site BS02

Receptor Information
>1ma7 Chain A (length=323) Species: 10678 (Punavirus P1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TSDEVRKNLMDMFRDRQAFSEHTWKMLLSVCRSWAAWCKLNNRKWFPAEP
EDVRDYLLYLQARGLAVKTIQQHLGQLNMLHRRSGLPRPSDSNAVSLVMR
RIRKENVDAGERAKQALAFERTDFDQVRSLMENSDRCQDIRNLAFLGIAY
NTLLRIAEIARIRVKDISRTDGGRMLIHIGRTKTLVSTAGVEKALSLGVT
KLVERWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSTRALEGIFEAT
HRLIYGAKDDSGQRYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTNV
NIVMNYIRNLDSETGAMVRLLED
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1ma7 Modulation of the active complex assembly and turnover rate by protein-DNA interactions in Cre-LoxP recombination
Resolution2.3 Å
Binding residue
(original residue number in PDB)		M44 S47 R50 R81 L83 A84 K86 T87 Q90 A131 R159 T202 R241 V242 K244 S257 R259 A260 R282 W315 I320 Y324
Binding residue
(residue number reindexed from 1)		M26 S29 R32 R63 L65 A66 K68 T69 Q72 A113 R141 T184 R223 V224 K226 S239 R241 A242 R264 W297 I302 Y306
Binding affinityPDBbind-CN: Kd=146nM
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0006310 DNA recombination
GO:0015074 DNA integration

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Molecular Function
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Biological Process
External links
PDB RCSB:1ma7, PDBe:1ma7, PDBj:1ma7
PDBsum1ma7
PubMed12779336
UniProtP06956|RECR_BPP1 Recombinase cre (Gene Name=cre)

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