Structure of PDB 1lkb Chain A Binding Site BS02

Receptor Information

>1lkb Chain A (length=240) Species: 9823 (Sus scrofa)

VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRE
LTFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLA
QSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYL
PTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQY
AVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVIASN

Ligand information

• Ligand ID: NA
• InChI: InChI=1S/Na/q+1
• InChIKey: FKNQFGJONOIPTF-UHFFFAOYSA-N
• SMILES:
  ACDLabs 10.04
  CACTVS 3.341
  OpenEye OEToolkits 1.5.0: [Na+]
• Formula: Na
• Name: SODIUM ION
• DrugBank: DB14516
• PDB chain: 1lkb Chain A Residue 401

Receptor-Ligand Complex Structure

Structure summary

• PDB: 1lkb Metal binding to porcine pancreatic elastase: calcium or not calcium.
• Resolution: 1.7 Å
• Binding residue (original residue number in PDB): E59 N61 Q64 N65 D66 E69
• Binding residue (residue number reindexed from 1): E59 N61 Q64 N65 D66 E69
• Annotation score: 3

Enzymatic activity

• Catalytic site (original residue number in PDB): H45 D93 Q185 G186 D187 S188 G189
• Catalytic site (residue number reindexed from 1): H45 D93 Q185 G186 D187 S188 G189
• Enzyme Commision number: 3.4.21.36: pancreatic elastase.

Gene Ontology

Molecular Function

• GO:0004252 serine-type endopeptidase activity
• GO:0005515 protein binding
• GO:0008236 serine-type peptidase activity
• GO:0046872 metal ion binding

Biological Process

• GO:0006508 proteolysis

Cellular Component

• GO:0005576 extracellular region
• GO:0005615 extracellular space

External links

• PDB: RCSB:1lkb, PDBe:1lkb, PDBj:1lkb
• PDBsum: 1lkb
• PubMed: 12198296
• UniProt: P00772|CELA1_PIG Chymotrypsin-like elastase family member 1 (Gene Name=CELA1)