Structure of PDB 1ihf Chain A Binding Site BS02
Receptor Information
>1ihf Chain A (length=96) Species:
562
(Escherichia coli) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQVKLSGFGN
FDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPK
Ligand information
>1ihf Chain D (length=15) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ggccaaaaaagcatt
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1ihf
Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn.
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
G48 K86
Binding residue
(residue number reindexed from 1)
G47 K85
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000976
transcription cis-regulatory region binding
GO:0001216
DNA-binding transcription activator activity
GO:0003677
DNA binding
GO:0030527
structural constituent of chromatin
GO:0043565
sequence-specific DNA binding
Biological Process
GO:0006310
DNA recombination
GO:0006351
DNA-templated transcription
GO:0006355
regulation of DNA-templated transcription
GO:0006417
regulation of translation
GO:0045893
positive regulation of DNA-templated transcription
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
GO:0009295
nucleoid
GO:0032993
protein-DNA complex
GO:1990177
IHF-DNA complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1ihf
,
PDBe:1ihf
,
PDBj:1ihf
PDBsum
1ihf
PubMed
8980235
UniProt
P0A6X7
|IHFA_ECOLI Integration host factor subunit alpha (Gene Name=ihfA)
[
Back to BioLiP
]