Structure of PDB 1h9d Chain A Binding Site BS02
Receptor Information
>1h9d Chain A (length=125) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
VLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLV
TVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVF
TNPPQVATYHRAIKITVDGPREPRR
Ligand information
>1h9d Chain F (length=10) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
caaccgcaac
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1h9d
The Leukemia-Associated Aml1 (Runx1)-Cbfbeta Complex Functions as a DNA-Induced Molecular Clamp
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
R142 G143 K167 T169 V170 D171
Binding residue
(residue number reindexed from 1)
R89 G90 K114 T116 V117 D118
Binding affinity
PDBbind-CN
: Kd=10pM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003700
DNA-binding transcription factor activity
GO:0005524
ATP binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
Cellular Component
GO:0005634
nucleus
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1h9d
,
PDBe:1h9d
,
PDBj:1h9d
PDBsum
1h9d
PubMed
11276260
UniProt
Q01196
|RUNX1_HUMAN Runt-related transcription factor 1 (Gene Name=RUNX1)
[
Back to BioLiP
]