Structure of PDB 1gdt Chain A Binding Site BS02

Receptor Information

>1gdt Chain A (length=183) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

MRLFGYARVSTSQQSLDIQVRALKDAGVKANRIFTDKASGSSSDRKGLDL
LRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDGISTD
GEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKIDRDA
VLNMWQQGLGASHISKTMNIARSTVYKVINESN

Ligand information

>1gdt Chain E (length=21) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

cagtgtccgataatttataaa

Receptor-Ligand Complex Structure

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Structure summary

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PDB	1gdt Crystal structure of the site-specific recombinase gamma delta resolvase complexed with a 34 bp cleavage site.
Resolution	3.0 Å
Binding residue (original residue number in PDB)	R119 L123 R130
Binding residue (residue number reindexed from 1)	R119 L123 R130

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0000150	DNA strand exchange activity
GO:0003677	DNA binding

	Biological Process
GO:0006310	DNA recombination
GO:0015074	DNA integration

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Molecular Function

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Biological Process

External links

PDB	RCSB:1gdt, PDBe:1gdt, PDBj:1gdt
PDBsum	1gdt
PubMed	7628011
UniProt	P03012\|TNR1_ECOLI Transposon gamma-delta resolvase (Gene Name=tnpR)

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