Structure of PDB 1ga5 Chain A Binding Site BS02
Receptor Information
>1ga5 Chain A (length=82) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
VLLCKVCGDVASGFHYGVLACEGCKGFFRRSIQQNIQYKRCLKNENCSIV
RINRNRCQQCRFKKCLSVGMSRDAVRFGRIPK
Ligand information
>1ga5 Chain D (length=20) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ctgacctagtgacctagtug
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1ga5
DNA Deformability as a Recognition Feature in the RevErb Response Element
Resolution
2.4 Å
Binding residue
(original residue number in PDB)
E19 G20 F24 R27 R50 N51 Q54 R57 F73 G74 R75 P77
Binding residue
(residue number reindexed from 1)
E22 G23 F27 R30 R54 N55 Q58 R61 F77 G78 R79 P81
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003700
DNA-binding transcription factor activity
GO:0008270
zinc ion binding
GO:0043565
sequence-specific DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:1ga5
,
PDBe:1ga5
,
PDBj:1ga5
PDBsum
1ga5
PubMed
11669620
UniProt
P20393
|NR1D1_HUMAN Nuclear receptor subfamily 1 group D member 1 (Gene Name=NR1D1)
[
Back to BioLiP
]