Structure of PDB 1ddl Chain A Binding Site BS02
Receptor Information
>1ddl Chain A (length=188) Species:
70821
(Desmodium yellow mottle virus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MEQDKILAHQASLNTKPSLLPPPVGNPPPVISYPFQITLASLGTEDAADS
VSIASNSVLATYTALYRHAQLKHLKATIHPTYMAPKYPTSVALVWVPANS
TATSTQVLDTYGGLHFCIGGSVNSVKPIDVEANLTNLNPIIKASTTFTDT
PKLLYYSKAQATAPTSPTCYLTIQGQIELSSPLLQASS
Ligand information
>1ddl Chain E (length=2) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
uu
..
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1ddl
Refined structure of desmodium yellow mottle tymovirus at 2.7 A resolution.
Resolution
2.7 Å
Binding residue
(original residue number in PDB)
L93 V94 W95 V107 T110 Y111 G112 G113 L114 V130 E131 N133 N136
Binding residue
(residue number reindexed from 1)
L93 V94 W95 V107 T110 Y111 G112 G113 L114 V130 E131 N133 N136
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005198
structural molecule activity
Cellular Component
GO:0019028
viral capsid
GO:0044423
virion component
View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB
RCSB:1ddl
,
PDBe:1ddl
,
PDBj:1ddl
PDBsum
1ddl
PubMed
10966774
UniProt
O89511
[
Back to BioLiP
]