Structure of PDB 1b8i Chain A Binding Site BS02
Receptor Information
>1b8i Chain A (length=62) Species:
7227
(Drosophila melanogaster) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
FYPWMARQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALSLTERQIKIW
FQNRRMKLKKEI
Ligand information
>1b8i Chain D (length=15) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
acgtgatttatggcg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1b8i
Structure of a DNA-bound Ultrabithorax-Extradenticle homeodomain complex.
Resolution
2.4 Å
Binding residue
(original residue number in PDB)
R105 Q106 Y108 R143 Q144 I147 N151 K155
Binding residue
(residue number reindexed from 1)
R7 Q8 Y10 R45 Q46 I49 N53 K57
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000981
DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677
DNA binding
GO:0003700
DNA-binding transcription factor activity
Biological Process
GO:0006355
regulation of DNA-templated transcription
Cellular Component
GO:0005634
nucleus
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1b8i
,
PDBe:1b8i
,
PDBj:1b8i
PDBsum
1b8i
PubMed
10067897
UniProt
P83949
|UBX_DROME Homeotic protein ultrabithorax (Gene Name=Ubx)
[
Back to BioLiP
]