Structure of PDB 112m Chain A Binding Site BS02
Receptor Information
>112m Chain A (length=154) Species:
9755
(Physeter catodon) [
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MVLSEGEWQLVLHVWAKVEADVAGHGQDILIRLFKSHPETLEKFDRFKHL
KTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKI
PIKYLEFISEAIIHVLHSRHPGNFGADAQGAMNKALELFRKDIAAKYKEL
GYQG
Ligand information
Ligand ID
NPN
InChI
InChI=1S/C4H7N/c1-3-4-5-2/h3-4H2,1H3
InChIKey
FFDKYFGBIQQMSR-UHFFFAOYSA-N
SMILES
Software
SMILES
isocyanide
CACTVS 3.341
OpenEye OEToolkits 1.5.0
CCC[N+]#[C-]
Formula
C4 H7 N
Name
N-PROPYL ISOCYANIDE
ChEMBL
DrugBank
DB04050
ZINC
PDB chain
112m Chain A Residue 156 [
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Receptor-Ligand Complex Structure
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PDB
112m
Correlations between Bound N-Alkyl Isocyanide Orientations and Pathways for Ligand Binding in Recombinant Myoglobins
Resolution
2.34 Å
Binding residue
(original residue number in PDB)
L29 F43 H64 V68
Binding residue
(residue number reindexed from 1)
L30 F44 H65 V69
Annotation score
1
Enzymatic activity
Enzyme Commision number
1.11.1.-
1.7.-.-
Gene Ontology
Molecular Function
GO:0004601
peroxidase activity
GO:0005344
oxygen carrier activity
GO:0016491
oxidoreductase activity
GO:0019825
oxygen binding
GO:0020037
heme binding
GO:0046872
metal ion binding
GO:0098809
nitrite reductase activity
Biological Process
GO:0015671
oxygen transport
GO:0019430
removal of superoxide radicals
Cellular Component
GO:0005737
cytoplasm
GO:0016528
sarcoplasm
GO:0070062
extracellular exosome
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:112m
,
PDBe:112m
,
PDBj:112m
PDBsum
112m
PubMed
UniProt
P02185
|MYG_PHYMC Myoglobin (Gene Name=MB)
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