Structure of PDB 5e7k Chain 6E Binding Site BS02

Receptor Information

>5e7k Chain 6E (length=154) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

ARRRRAEVRQLQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQ
EKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLAL
RWLVQAANQRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEANRAY
AHYR

Ligand information

>5e7k Chain 3K (length=76) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

gggucguuagcucaguugguagagcaguugacuuuuaaucaauuggucgc
agguucgaauccugcacgacccacca

<<<<<<...<<<<........>>>>.<<<<<.......>>>>>......<
<<<.......>>>>..>>>>>>....

Receptor-Ligand Complex Structure

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Structure summary

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PDB	5e7k Novel base-pairing interactions at the tRNA wobble position crucial for accurate reading of the genetic code.
Resolution	3.2 Å
Binding residue (original residue number in PDB)	S77 N84 Q86 R143 M144 A147 N148
Binding residue (residue number reindexed from 1)	S76 N83 Q85 R142 M143 A146 N147

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0000049	tRNA binding
GO:0003723	RNA binding
GO:0003729	mRNA binding
GO:0003735	structural constituent of ribosome
GO:0019843	rRNA binding

	Biological Process
GO:0000028	ribosomal small subunit assembly
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome
GO:0015935	small ribosomal subunit
GO:0022627	cytosolic small ribosomal subunit
GO:1990904	ribonucleoprotein complex

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External links

PDB	RCSB:5e7k, PDBe:5e7k, PDBj:5e7k
PDBsum	5e7k
PubMed	26791911
UniProt	P17291\|RS7_THET8 Small ribosomal subunit protein uS7 (Gene Name=rpsG)

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