Structure of PDB 6zsd Chain 6 Binding Site BS02

Receptor Information

>6zsd Chain 6 (length=354) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

RRTPPLGPMPNSDIDLSNLERLEKYRSFDRYRRRAEQEAQAPHWWRTYRE
YFGEKTDPKEKIDIGLPPPKVSRTQQLLERKQAIQELRANVEEERAARLR
TASVPLDAVRAEWERTCGPYHKQRLAEYYGLYRDLFHGATFVPRVPLHVA
YAVGEDDLMPVYCGNEVTPTEAAQAPEVTYEAEEGSLWTLLLTSLDGHLL
EPDAEYLHWLLTNIPGNRVAEGQVTCPYLPPFPARGSGIHRLAFLLFKQD
QPIDFSEDARPSPCYQLAQRTFRTFDFYKKHQETMTPAGLSFFQCRWDDS
VTYIFHQLLDMREPVFEFVRPPPYHPKQKRFPHRQPLRYLDRYRDSHEPT
YGIY

Ligand information

>6zsd Chain XB (length=59) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

agaguguagcuuaaacaaagcacccaacuuacacuuaggagauucaauug
acgcucuga

<<<<<...<<<.......>>>.<<.<<.......>>.>>....<<<<>>>
>.>>>>>..

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	6zsd Structural basis of mitochondrial translation.
Resolution	3.7 Å
Binding residue (original residue number in PDB)	R52 S53 R56 L103 R106 R114 C143 Y146
Binding residue (residue number reindexed from 1)	R26 S27 R30 L77 R80 R88 C117 Y120

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0005515	protein binding

	Biological Process
GO:0032543	mitochondrial translation

	Cellular Component
GO:0005739	mitochondrion
GO:0005743	mitochondrial inner membrane
GO:0005762	mitochondrial large ribosomal subunit
GO:0005829	cytosol
GO:0005840	ribosome
GO:1990904	ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component

External links

PDB	RCSB:6zsd, PDBe:6zsd, PDBj:6zsd
PDBsum	6zsd
PubMed	32812867
UniProt	Q96DV4\|RM38_HUMAN Large ribosomal subunit protein mL38 (Gene Name=MRPL38)

[Back to BioLiP]