Structure of PDB 6ke6 Chain 5C Binding Site BS02 |
| >6ke6 Chain 5C (length=535) Species: 559292 (Saccharomyces cerevisiae S288C)
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KERENQNKFERSTYTNNQTKDKKLRAGLKKIDEQYKKAVSSAAATDYLLP
ESNGYLEPENELEKTFKVQQSEIKSSVDVSTANKALDLSLKEFGPYHIKY
AKNGTHLLITGRKGHVASMDWRKGQLRAELFLNETCHSATYLQNEQYFAV
AQKKYTFIYDHEGTELHRLKQHIEARHLDFLPYHYLLVTAGETGWLKYHD
VSTGQLVSELRTKAGPTMAMAQNPWNAVMHLGHSNGTVSLWSPSMPEPLV
KLLSARGPVNSIAIDRSGYYMATTGADRSMKIWDIRNFKQLHSVESLPTP
GTNVSISDTGLLALSRGPHVTLWKDALKLSGDSKPCFGSMGGNPHRNTPY
MSHLFAGNKVENLGFVPFEDLLGVGHQTGITNLIVPGAGEANYDALELNP
FETKKQRQEQEVRTLLNKLPADTITLDPNSIGSVDKRSSTIRLNAKDLAQ
TTMDANNKAKTNSDIPDVKPDVKGKNSGLRSFLRKKTQNVIDERKLRVQK
QLDKEKNIRKRNHQIKQGLISEDHKDVIEEALSRF |
|
| >6ke6 Chain 5A (length=522)
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ugcgaaagcagugaagacaaguggcuugucguucguuaaaauggccucgu
caaacgguggagagagucgcuaggugaucgucagaucugccuagucucua
uacagcguguuuaauugacauggguugaugcguauugagagauacaauuu
gggaagaaauucccagaguguguuucuuuugcguuuaaccugaacagucu
caucgugggcaucuugcgauuccauuggugagcagcgaaggauuuggugg
auuacuagcuaauagcaaucuauuucaaagaauucaaacuugggggaaug
ccuuguugaauagccggucgcaagacugugauucuucaaguguaaccucc
ucucaaaucagcgauaucaaacguaccaccgugaaacaccgggguaucug
uuugguggaaccugauuagaggaaacucaaagagugcuaugguaugguga
cggagugcgcuggucaagaguguaaaagcuuuuugaacagagagcauuuc
cggcagcagagauuucagcugu |
<<<....>>>..<<<<<<<<<<.>>>>>>>.>>>..............<<
<<<<<<.<<...<<<<..<<<<<<<<<<<....>>>>.>>>>>>>>>>>.
..>>.>>>......>>>>>..<<<<<..........<<<<<<<<<<.<<<
<<<<<....>>>>>>>>.>>>>>>>>>>........>>>>>.......<<
<<<<<<<<<...........>>>>>.>>>>>>..................
.......<<<...>>>.........................<<<<<...<
<<<<<..<<<<...<<<<<....>>>>>.>.>>>..>>>>.>>..>>>>>
.....<<<<<<...<<<<<<<<<<<<<.<<<........>>>>>>>.>.>
>>>>>>>....>>>>>>.................................
<<<<<<<<.<<<.<<<<<<<<......>>>>.>>>>.>>>...>>>>.>>
>>.<<<<.<<<..>>>.>>>>. |
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| PDB | 6ke6 3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome |
| Resolution | 3.4 Å |
Binding residue
(original residue number in PDB) | K82 F84 Q164 H179 I191 E192 E210 T211 W213 K215 L224 R229 A232 G233 L271 R274 G356 S357 M358 G359 G360 R364 A374 R425 Q426 P484 D485 K493 N494 S495 L497 R502 K503 R512 R527 H531 |
Binding residue
(residue number reindexed from 1) | K64 F66 Q146 H161 I173 E174 E192 T193 W195 K197 L206 R211 A214 G215 L253 R256 G338 S339 M340 G341 G342 R346 A356 R407 Q408 P466 D467 K475 N476 S477 L479 R484 K485 R494 R509 H513 |
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| Enzyme Commision number |
? |
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Biological Process |
| GO:0000447 |
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| GO:0000462 |
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| GO:0000472 |
endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| GO:0000480 |
endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| GO:0006364 |
rRNA processing |
| GO:0030490 |
maturation of SSU-rRNA |
| GO:0042254 |
ribosome biogenesis |
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