Structure of PDB 9b00 Chain 2g Binding Site BS02

Receptor Information
>9b00 Chain 2g (length=155) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ARRRRAEVRQLQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQ
EKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLAL
RWLVQAANQRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEANRAY
AHYRW
Ligand information
>9b00 Chain 2y (length=73) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gcccggauagcucagggagagcaggggauugaaaauccccguguccuugg
uucgauuccgaguccgggcacca
<<<<<<<..<<<<.....>>>>.<<<<<<.....>>>>>>.....<<<<<
.......>>>>>>>>>>>>....
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB9b00 Berberine analog of chloramphenicol exhibits a distinct mode of action and unveils ribosome plasticity.
Resolution2.8 Å
Binding residue
(original residue number in PDB)
D140 R143 M144 A147
Binding residue
(residue number reindexed from 1)
D139 R142 M143 A146
External links
PDB RCSB:9b00, PDBe:9b00, PDBj:9b00
PDBsum9b00
PubMed39019034
UniProtP17291|RS7_THET8 Small ribosomal subunit protein uS7 (Gene Name=rpsG)

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