Structure of PDB 9b00 Chain 2Z Binding Site BS02
Receptor Information
>9b00 Chain 2Z (length=160) Species:
300852
(Thermus thermophilus HB8) [
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MEYRLKAYYREGEKPSALRRAGKLPGVMYNRHLNRKVYVDLVEFDKVFRQ
ASIHHVIVLELPDGQSLPTLVRQVNLDKRRRRPEHVDFFVLSDEPVEMYV
PLRFVGHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELA
VSPEETIAAV
Ligand information
>9b00 Chain 2B (length=120) [
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ucccccgugcccauagcggcguggaaccacccguucccauuccgaacacg
gaagugaaacgcgccagcgccgaugguacugggcgggcgaccgccuggga
gaguaggucggugcggggga
.<<<<<<<<<<....<<<<<<<<....<<<<<<...............>>
>..>>>...>>>>>>.>><<<.......<<<<<<<<....>>>>>>>>..
.....>>>.>>>>>>>>>>.
Receptor-Ligand Complex Structure
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PDB
9b00
Berberine analog of chloramphenicol exhibits a distinct mode of action and unveils ribosome plasticity.
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
R10 P15 R19 Y29 N30 N34 R72 Q73 R79 H85 D87
Binding residue
(residue number reindexed from 1)
R10 P15 R19 Y29 N30 N34 R72 Q73 R79 H85 D87
External links
PDB
RCSB:9b00
,
PDBe:9b00
,
PDBj:9b00
PDBsum
9b00
PubMed
39019034
UniProt
Q5SHZ1
|RL25_THET8 Large ribosomal subunit protein bL25 (Gene Name=rplY)
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