Structure of PDB 3jan Chain z Binding Site BS01

Receptor Information
>3jan Chain z (length=426) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLR
ENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNV
IMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNAT
KARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFE
EMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGH
AKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMQFTLRD
MYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDS
MNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMV
KKMAAAAAAAAAAAAAAAAAAAAAAA
Ligand information
>3jan Chain 4 (length=206) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gccgggcgcgguggcgcgcgccuguagucccagcuacucgggaggcugag
gcuggaggaucgcuuuagcgagaccccgucucgacuaaguucggcaucaa
uauggugaccucccgggagcgggggaccaccagguugccuaaggaggggu
gaaccggcccaggucggaaacggagcaggucaaaacucccgugcugauca
guaguu
<<<<<<<<<<..(((.>>>>>>>....<<<<.)))....>>>>>>>..<<
<<.<<....<<<<<..>>>>>...>>.>>>>.<<<<.<..<<<<<<<<<<
<.<<<<<..<<<<<<....>>>>>>..>>>>>.>>>>........<<<<<
.....<<<<....<<<....>>>....>>>>...>>>>>.>>>>>>>...
.>>>>>
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3jan Structures of the scanning and engaged states of the mammalian SRP-ribosome complex.
Resolution3.75 Å
Binding residue
(original residue number in PDB)		K374 T377 I378 D380 S381 M382 N383 Q385 K398 Q399 G401 R402 R405 V406 R408 G409 S410 G411 V412
Binding residue
(residue number reindexed from 1)		K343 T346 I347 D349 S350 M351 N352 Q354 K367 Q368 G370 R371 R374 V375 R377 G378 S379 G380 V381
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Mon Nov 25 14:48:03 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '3jan', asym_id = 'z', bs = 'BS01', title = 'Structures of the scanning and engaged states of the mammalian SRP-ribosome complex.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='3jan', asym_id='z', bs='BS01', title='Structures of the scanning and engaged states of the mammalian SRP-ribosome complex.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0003924,0005525,0006614,0008312,0016887,0048500', uniprot = '', pdbid = '3jan', asym_id = 'z'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003924,0005525,0006614,0008312,0016887,0048500', uniprot='', pdbid='3jan', asym_id='z')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>