Structure of PDB 7fj3 Chain y Binding Site BS01

Receptor Information
>7fj3 Chain y (length=1311) Species: 10345 (Suid alphaherpesvirus 1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RPAILPSGQILSNIEVHSHRALFDIFKRFRSDDNNLYGAEFDALLGTYCS
TLSLVRFLELGLSVACVCTKFPELSYVAEGTIQFEVQQPMIARDGPHPAD
QPVHNYMIKRLDRRSLNAAFSIAVEALGLISGENLDGTHISSAMRLRAIQ
QLARNVQAVLDSFERGTADQMLRVLMEKAPPLSLLAPFTLYEGRLADRVA
CAALVSELKRRVRDDTFFLTKHERNKDAVLDRLSDLVNCTAPSVAVARMT
HADTQGRPVDGVLVTTAGVRQRLLHHVLTLADTHADVPVTYGEMVIANTN
LVTALVMGKAVSNMDDVARYLLGGGSARVRADLVVVGDRLVFLEALEKRV
YQATQVPYPLVGNLDVTFVMPLGVFKPAADRYARHAGSFAPTPGLPDPRT
HPPRAVHFFNKDGVPCHVTFEHAMGTLCHPSFLDVDATLAALRQEPAEVQ
CAFGAYVADARPDALVGLMQRFLEEWPGMMPVRPRWAAPAAADQLLAPGN
ADLRLELHPAFDFFVAPEVDVPGPFAVPQVMGQVRAMPRIINGNIPLALC
PVDFRDARGFELSVDRHRLAPATVAAVRGAFRDANYPMVFYIIEAVIHGS
ERTFCALARLVAQCIQSYWRNTHNAAFVNNFYMVMYINTYLGNGELPEDC
AAVYKDLLEHVHALRRLIGEFTLPGDPLGNQPQEELNHALADATLLPPLI
WDCDPILYRDGLAERLPELRVNGAHFQHILWVEMAQVNFRNVGGGLVHNR
PVRNENQPLHPHHDAEWSVLSKIYYYAVVPAFSRGNCCTMGVRYDRVYQL
VQTMVVPETDEEVGTDDPRHPLHPRNLVPNSLNVLFHNACVAVDADAMLI
LQETVTNMAERTTPLLASVAPDAGMATVATRDMRTHDGSLHHGLLMMAYQ
PNDATLLEGAFFYPAPVNALFACADHLGAMRDVGAEVRAAAQHVPCVPHF
LGANYYATVRQPVAQHAAQSRADENTLSYALMAGYFKMSPVAFTHQLRRQ
LHPGFALTVVRQDRFATENVLFAEKASESYFMGQMQVARTESGGGLHLQL
TQPRANVDLGVGFTAAYAAAALRAPVTDMGNLPQNLFATRGAPPMLDADA
DDYLRRTVNAGNRLAPVPVFGQMLPQVPAGLARGQQSVCEFIATPVSVDL
AYFRRACNPRGRAAGEVHGEEGLMFDHSHADPAHPHRATANPWASQRHSY
ADRLYNGQYNMSGPAYSPCFKFFTPAEAVAKSRGLARLIADTGAAASPTS
NGEYQFKRPVGAGELVEDPCALFQEAYPPLCASDSALLRTPLGAEEHFAQ
YLIRDESPLKG
Ligand information
>7fj3 Chain D (length=23) Species: 10345 (Suid alphaherpesvirus 1) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
MSVQIGNGLLMVVAPGTLTVGSA
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7fj3 Structures of pseudorabies virus capsids.
Resolution4.53 Å
Binding residue
(original residue number in PDB)		A125 V126 E127 A128 L129 G130 L131 R1051 L1058
Binding residue
(residue number reindexed from 1)		A123 V124 E125 A126 L127 G128 L129 R1039 L1046
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid
GO:0039622 T=16 icosahedral viral capsid

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Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:7fj3, PDBe:7fj3, PDBj:7fj3
PDBsum7fj3
PubMed35318331
UniProtG3G8T2

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