Structure of PDB 6ytf Chain t Binding Site BS01

Receptor Information
>6ytf Chain t (length=83) Species: 575584 (Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PRSLKKGPFVDAHLFAKVEAAVASNSRKPIKTWSRRSMILPDFVGLTISV
HNGRNHVPVIVTEHMVGHKLGEFAPTRTYRGHG
Ligand information
>6ytf Chain 3 (length=453) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gggcccgcacaagcgguggagcaugugguuuaauucgaugcaacgcgaag
aaccuuaccuggccuugacauacuagaaacuuuccagagauggauuggug
aaucuagauacaggugcugcauggcugucgucagcucgugucgugagaug
uuggguuaagucccgcaacgagcgcaacccuuuuccuuacuugccagcau
uucggaugggaacuuuaaggauacugccagugacaaacuggaggaaggcg
gggacgacgucaagucaucauggcccuuacggccagggcuacacacgugc
uacaauggucgguacaaaggguugcuacacagcgaugugaugcuaaucuc
aaaaagccgaucguaguccggauuggagucugcaacucgacuccaugaag
ucggaaucgcuaguaaucgcggaucagaaugccgcggugaauacguuccc
ggg
...<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>...
.......<<<<<<<......<<<<<<...<..<<<<....>>>>..>...
...>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>.
.<<<<......>>>>..>>>>>>.....<<<<.<<<<<<....<<..<<<
.....>>>>>.....>>>>>>.....<<<<<.....>>>>>........>
>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>
>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>
.....>>>>>>>......<....<<<<<<<........>>>>>>>....>
.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>
>>>
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6ytf Structure of the 70S Ribosome from the Human Pathogen Acinetobacter baumannii in Complex with Clinically Relevant Antibiotics.
Resolution3.0 Å
Binding residue
(original residue number in PDB)		R3 S4 L5 K6 K7 F10 H14 K18 W34 R36 R37 G54 R55 K70 G72 E73 T77 R78 T79 Y80 H83
Binding residue
(residue number reindexed from 1)		R2 S3 L4 K5 K6 F9 H13 K17 W33 R35 R36 G53 R54 K69 G71 E72 T76 R77 T78 Y79 H82
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6ytf, PDBe:6ytf, PDBj:6ytf
PDBsum6ytf
PubMed32857965
UniProtD0CD01

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