Structure of PDB 6ybv Chain t Binding Site BS01

Receptor Information
>6ybv Chain t (length=356) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EVISRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGY
ANAKIHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEH
LAAIEIMKLKHILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIP
ISAQLKYNIEVVCEYIVKKIPVPPRDFTSEPRLIVIRSVAGGSILKGVLK
VGQEIEVRPGIVSKKLMCKPIFSKIVSLFAEHNDLQYAAPGGLIGVGTKI
DPTLCRADRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRKLSKNEVL
MVNIGSLSTGGRVSAVKADLGKIVLTNPVCTEVGEKIALSRRVEKHWRLI
GWGQIR
Ligand information
>6ybv Chain w (length=75) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
agcagaguggcgcagcggaagcgugcugggcccauaacccagaggucgau
ggaucgaaaccauccucugcuacca
.<<<<<<....<<.......>>...<<<<<.......>>>>>.....<<<
<<.......>>>>>>>>>>>.....
Receptor-Ligand Complex Structure
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PDB6ybv Structure of a human 48Stranslational initiation complex.
Resolution3.8 Å
Binding residue
(original residue number in PDB)		V67 R68 S261 V278 R349 A350
Binding residue
(residue number reindexed from 1)		V34 R35 S188 V189 R256 A257
Enzymatic activity
Enzyme Commision number 3.6.5.3: protein-synthesizing GTPase.
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003743 translation initiation factor activity
GO:0003924 GTPase activity
GO:0005515 protein binding
GO:0005525 GTP binding
GO:0008135 translation factor activity, RNA binding
GO:0016787 hydrolase activity
GO:0045296 cadherin binding
GO:1990856 methionyl-initiator methionine tRNA binding
Biological Process
GO:0001731 formation of translation preinitiation complex
GO:0002183 cytoplasmic translational initiation
GO:0006412 translation
GO:0006413 translational initiation
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005850 eukaryotic translation initiation factor 2 complex
GO:0070062 extracellular exosome

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6ybv, PDBe:6ybv, PDBj:6ybv
PDBsum6ybv
PubMed32883864
UniProtP41091|IF2G_HUMAN Eukaryotic translation initiation factor 2 subunit 3 (Gene Name=EIF2S3)

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