Structure of PDB 8cqw Chain q Binding Site BS01

Receptor Information
>8cqw Chain q (length=189) Species: 5476 (Candida albicans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKYIQTDQILDIPEGVTVDIKARVVKVTGPRGELTKDLKHIDVTFNKINN
RAIKITVHNGDRKHVAALRTVKSLIANLITGVTKGYKYKMRFVYAHFPIN
VNIIKKDGQDYVEIRNFLGEKRVREVKIHEGVTMEISSTQKDELIVSGNS
LEAVSQNAADIQQICRVRNKDIRKFLDGIYVSERGTIVE
Ligand information
>8cqw Chain 1 (length=3208) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ugaccucaaaucagguaggacuacccgcugaacuuaagcauaucaauaag
cggaggaaaagaaaccaacagggauugccucaguagcggcgagugaagcg
gcaaaagcucaaauuugaaaucuggcgucuuuggcguccgaguuguaauu
ugaagaagguaucuuugggcccggcucuugucuauguuccuuggaacagg
acgucacagagggugagaaucccgugcgaugagaugacccgggucugugu
aaaguuccuucgacgagucgaguuguuugggaaugcagcucuaagugggu
gguaaauuccaucuaaagcuaaauauuggcgagagaccgauagcgaacaa
guacagugauggaaagaugaaaagaacuuugaaaagagagugaaaaagua
cgugaaauuguugaaagggaagggcuugagaucagacuugguauuuuugc
gguuuaccgggccagcaucgguuuggagcggcaggauaauggcggaggaa
uguggcacggcuucugcuguguguuauagccucugacgauacugccagcc
uagaccgaggacugcgguuaccuaggauguuggcauaaugaucuuaaguc
gcccgucuugaaacacggaccaaggagucuaacgucuaugcgaguguuug
gguguaaaacccguacgcguaaugaaagugaacgaaggugggggcccauu
agggugcaccaucgaccgauccugauguguucggauggauuugaguaaga
gcauagcuguugggacccgaaagauggugaacuaugccugaauaggguga
agccagaggaaacucugguggaggcucguagcgguucugacgugcaaauc
gaucgucgaauuuggguauaggggcgaaagacuaaucgaaccaucuagua
gcugguuccugccgaaguuucccucaggauagcagaagcucguaucaguu
uuaugagguaaagcgaaugauuagaagucuugggguugaaaugaccuuaa
cuuauucucaaacuuuaaauauguaagaaguccuuguugcuuaauugaac
guggacaauugaaugaagagcuuuuagugggccauuuuugguaagcagaa
cuggcgaugcgggaugaaccgaacgugaaguuaaagugccggaaugcacg
cucaucagacaccacaaaagguguuaguucaucuagacagccggacggug
gccauggaagucggaauccgcuaaggaguguguaacaacucaccggccga
augaacuagcccugaaaauggauggcgcucaagcgugcuacuuauacuuc
accgugauugcuguuuugacgcuuucacgaguaggcaggcguggagguca
gugacgaagccuuugcuguaaagcugggucgaacggccucuagugcagau
cuuggugguaguagcaaauauucaaaugagaacuuugaagacugaagugg
ggaaagguuccaugucaacagcaguuggacauggguuagucgauccuaag
agauggggaagcuccguuucaacgugcuugauuuuucaggccaaccaucg
aaagggaauccgguuaaaauuccggaacuuggauauggauucuucacggc
aacguaacugaauguggagacgucggcgugagcccugggaggaguuaucu
uuucuucuuaacagcuuaucacccuggaauugguuuauccggagaugggg
ucuuauggcuggaagagcgcgguaauuuugccgcguccggugcgcuuacg
acgguccuugaaaauccacaggaaggaauaguuuucaugccaagucguac
ucauaaccgcagcaggucuccaagguuaacagccucuaguugauagaaua
auguagauaagggaagucggcaaaauagauccguaacuucgggauaagga
uuggcucuaaggaucgguuuaacgaucaacuuagaacugguacggacaag
gggaaucugacugucuaauuaaaacauagcauugugauggucagaaagug
auguugacacaaugugauuucugcccagugcucugaaugucaaagugaag
aaauucaaccaagcgcggguaaacggcgggaguaacuaugacucucuuaa
gguagccaaaugccucgucaucuaauuagugacgcgcaugaauggauuaa
cgagauucccacugucccuaucuacuaucuagcgaaaccacagccaaggg
aacgggcuuggcagaaucagcggggaaagaagacccuguugagcuugacu
cuaguuugacauugugaaaagacauggaggguguagaauaagugggagcu
ucggccggugaaaccacuaccucuauaguuuuuuuacuuauucaaugaag
cggagcuggaggucaaacuccacguucuagcauuaagcccucugggcgau
ccggguugaagacauugucagguggggaguuuggcuggggcggcacaucu
guuaaacgauaacgcagguguccuaagggggacucauggagaacagaaau
cuccaguagaacaaaaggguaaaaguccccuugauuuugauuuucagugu
gaauacaaaccaugaaaguguggccuaucgauccuuuagucccucggaau
uugaggcuagaggugccagaaaaguuaccacagggauaacuggcuugugg
cagucaagcguucauagcgacauugcuuuuugauucuucgaugucggcuc
uuccuaucauaccgaagcagaauucgguaagcguuggauuguucacccac
uaauagggaacgugagcuggguuuagaccgucgugagacagguuaguuuu
acccuacugaugaauguuaucgcaauaguaauugaacuuaguacgagagg
aaccguucauucagauaauugguuuuugcggcugucugaucaggcaacgc
cgcgaagcuaccaucugcuggauuauggcugaacgccucuaagucagaau
ccaugcuagaacgcgaugauuuuugcccugcacauuuuagauggauacga
auaagacuuuuuagucgcuggaccauagcaggcuggcaacggugcgcuua
gcggaaaggcuuugugcgcuugccggcggauagcaaugucaacaugcgcg
gggauaaauccuuugcauacgacuuagauguacaacggaguauuguaagc
aguagaguagccuuguuguuacgaucugcugagauuaagcucuuguuguc
ugauuugu
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>>>>..>>>>>........<<<<<<<........>>>>>>>.....((((
(..<<<<<<)))))..]]]...............................
.<.<<....>>...>...........<<<<....>>>>............
......................<<<<<<<<<<<<.....<<<<..<....
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>>>>>>>........<<<.>>>.....>>>>>>>....>>>>>>>>>>>>
..<<<<........>>>><<<<<<....<<<<<<.<<<<<<..<<<..<<
<<<.....>>>>>..>>>...<<....>>.......<<<<<..<<<<...
.>>>>...>>>>>.<<<<<<<<...<<....>>...>>>.>>>.>>....
>>>>>>.>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<...
.<<<<<<<....>>>>>>>.....>>>...<<<<.<<.<<........>>
>>>>>>....>>>>>>>>>...<<.......>>......>>>>>>...>.
.>.>>..<<<<<<....<.<<<....>>>.><<<<<<<<<<...<<<.<<
<<<<<.....<<<....<<<....<<<<...<<<<<<.....>>>>>>.>
>>>....>>>..>.>>.....>>>>>...<<<<.<<<<.<......>>>>
>.>>>>.....>>>>>.>>>>>>>>.>>..<<<<.<<<<<.....>>>>>
.>>>>....<<<......>>>...<<<<<<<..<<<<(((.....<<<<<
<.....<<..........<<<.<<<<<<<<<<.......<<<<<.<<...
.<<.........>>....>>.........<<......>>...>>>>>...
>>>>>>>>>>>>>..........))).>>...>>>>>>.>>>>..>>>>>
>><<<<<..<<.........>>..>>>>>....>>>>>>..<<<<<<<<.
<<......<<<<..<<<....>>>.>>>>...>>>>>>>>>>........
>>>>>><<.....<<.....<<<<<<.......>>>>>><<<<.....<<
<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<
<....<<<....>>>..........<<<<<<....>>>>>>......>>.
...>>...<<<<<........>>>>>))<<<<.<<<<<<<.....<<<..
..>>>.......<<<<<<...<<<<.<<<<<<<.<<<<<<<<<<..{{{.
.>>>>>><...<<<<<....<<<<<<....<<<.....>>>....>>>>>
>.....>>>>>....><<<<<<<......>>>>>>>>>>>...>>>>>>>
.>>>>.........>>>>>>..........>>>..>>>>>>>>>>>>..>
>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<...
..<<<<<<<.<<...............<<<<<....<....>.....>>>
>><<.<<<<<<<<<<<......>>>>>..>>>>>>.>>............
<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>
>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<.
...>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>....
....<...........<<<<<.......>>>>>.....>.....>>....
>>.>>>>>>>.....>>.>>>>>>>..>>>>>>....>>....<<<<<..
......>>>>>....[[[[[..{{{.{{......[[[[.{{[[[[..<<<
<<.<<<<<<<<..<<<<<<<<<<...<.<<....................
....................>>.>...>>>>>>>>>>...<<<<<.....
<<<<..<<<<<......>>>>>..............<<<<...>>>>..>
>>>..>>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<
<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>
>>>>>.....<<...(((>>....>>>>>>>...<<<.<<<<<.......
>>>>.>>>>.<<<....>>>.>>))).......((((((..((((.>>>>
>>))))))))))..........]]]]..}}]]]].......<<.<...<<
<<<<...<<.......>>...>>>>>>....>.>.>.......<<<<<.<
<<<<<..<.<<<<<<<......>>>>>>>...>.<<<.........>>>.
....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....}}
..}}}.]]]]]....<<<<<<<<..<<<<...<<<<<.............
....>>>>>..<<<<<...<<<<....<<<<<<<<<<}}}.>>>>>..>>
>>>...>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>
>>>.>>>>....>>>>>>>>.....<<<<<<.<<<.<.....<<......
....<<<......>>>......>>.......<<<<<<...<<<<<<<..<
<<......>>>..>>>>>>>.>>>>>>..............>.>>>.>>>
>>>..<<<<<<<.............>>....<<<<<<<<<.<<<....<<
<<.<..<<<<<......>>>>>..>>>>>...>>>....>>>>.>>>>>.
.>>>>>..
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8cqw Drug-induced rotational movement of the ribosome is a key factor for read-through enhancement
Resolution3.05 Å
Binding residue
(original residue number in PDB)
M1 R23 H40 D42 V43 T44 H58 R62 A66 R69 T70 S73 H96 F97 E120 K121 R122 S155 Q156 Q163 R166 R168 K170 D171 R173 K174 F175
Binding residue
(residue number reindexed from 1)
M1 R23 H40 D42 V43 T44 H58 R62 A66 R69 T70 S73 H96 F97 E120 K121 R122 S155 Q156 Q163 R166 R168 K170 D171 R173 K174 F175
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