Structure of PDB 6ytf Chain n Binding Site BS01

Receptor Information
>6ytf Chain n (length=115) Species: 575584 (Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILAAVGITETTKIRELDDA
QLDAIRAEVAKVPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQR
TKTNARTRKGPRKPI
Ligand information
>6ytf Chain 3 (length=453) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gggcccgcacaagcgguggagcaugugguuuaauucgaugcaacgcgaag
aaccuuaccuggccuugacauacuagaaacuuuccagagauggauuggug
aaucuagauacaggugcugcauggcugucgucagcucgugucgugagaug
uuggguuaagucccgcaacgagcgcaacccuuuuccuuacuugccagcau
uucggaugggaacuuuaaggauacugccagugacaaacuggaggaaggcg
gggacgacgucaagucaucauggcccuuacggccagggcuacacacgugc
uacaauggucgguacaaaggguugcuacacagcgaugugaugcuaaucuc
aaaaagccgaucguaguccggauuggagucugcaacucgacuccaugaag
ucggaaucgcuaguaaucgcggaucagaaugccgcggugaauacguuccc
ggg
...<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>...
.......<<<<<<<......<<<<<<...<..<<<<....>>>>..>...
...>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>.
.<<<<......>>>>..>>>>>>.....<<<<.<<<<<<....<<..<<<
.....>>>>>.....>>>>>>.....<<<<<.....>>>>>........>
>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>
>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>
.....>>>>>>>......<....<<<<<<<........>>>>>>>....>
.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>
>>>
Receptor-Ligand Complex Structure
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PDB6ytf Structure of the 70S Ribosome from the Human Pathogen Acinetobacter baumannii in Complex with Clinically Relevant Antibiotics.
Resolution3.0 Å
Binding residue
(original residue number in PDB)		K13 I17 F23 G24 I25 G26 H28 I73 N76 Y86 R87 R90 H91 P96 V97 R98 Q100 R101 T102 K103 N105 A106 R107 T108 K110 K114
Binding residue
(residue number reindexed from 1)		K12 I16 F22 G23 I24 G25 H27 I72 N75 Y85 R86 R89 H90 P95 V96 R97 Q99 R100 T101 K102 N104 A105 R106 T107 K109 K113
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6ytf, PDBe:6ytf, PDBj:6ytf
PDBsum6ytf
PubMed32857965
UniProtD0CD19

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