Structure of PDB 5iv5 Chain n Binding Site BS01

Receptor Information
>5iv5 Chain n (length=526) Species: 10665 (Tequatrovirus T4) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SNNTYQHVSNESRYVKFDPTDTNFPPEITDVQAAIAAISPAGVNGVPDAS
STTKGILFIPTEQEVIDGTNNTKAVTPATLATRLSYPNATETVYGLTRYS
TNDEAIAGVNNESSITPAKFTVALNNAFETRVSTESSNGVIKISSLPQAL
AGADDTTAMTPLKTQQLAIKLIAQIAPSETTATESDQGVVQLATVAQVRQ
GTLREGYAISPYTFMNSSSTEEYKGVIKLGTQSEVNSNNASVAVTGATLN
GRGSTTSMRGVVKLTTTAGSQSGGDASSALAWNADVIQQRGGQIIYGTLR
IEDTFTIANGGANITGTVRMTGGYIQGNRIVTQNEIDRTIPVGAIMMWAA
DSLPSDAWRFCHGGTVSASDCPLYASRIGTRYGGNPSNPGLPDMRGLFVR
GSGRGSHLTNPNVNGNDQFGKPRLGVGCTGGYVGEVQIQQMSYHKHAGGF
GEHDDLGAFGNTRRSNFVGTRKGLDWDNRSYFTNDGYEIDPESQRNSKYT
LNRPELIGNETRPWNISLNYIIKVKE
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5iv5 Chain l Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5iv5 Structure of the T4 baseplate and its function in triggering sheath contraction.
Resolution4.11 Å
Binding residue
(original residue number in PDB)
H445 H447
Binding residue
(residue number reindexed from 1)
H444 H446
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Biological Process
GO:0046718 symbiont entry into host cell
GO:0098670 entry receptor-mediated virion attachment to host cell
Cellular Component
GO:0098015 virus tail
GO:0098024 virus tail, fiber
GO:0098025 virus tail, baseplate

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:5iv5, PDBe:5iv5, PDBj:5iv5
PDBsum5iv5
PubMed27193680
UniProtP10930|FIB12_BPT4 Short tail fiber protein gp12 (Gene Name=12)

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