Structure of PDB 3j9x Chain n Binding Site BS01

Receptor Information
>3j9x Chain n (length=128) Species: 157899 (Sulfolobus islandicus rod-shaped virus 2) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SRSYSQRYAKWQAKFNAFSNPTVASTILSNVSPVAQQNFQTNVPKFTSVN
ENVSAVLTQYGITGPNRAIYQGFGLKVARALNRIGSGPALVNMINGLKGY
YISAFNANPQVLDAVVNIITGSPTGYVS
Ligand information
>3j9x Chain 7 (length=348) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatat
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB3j9x A virus that infects a hyperthermophile encapsidates A-form DNA.
Resolution3.8 Å
Binding residue
(original residue number in PDB)		R8 K16 K20 S60 G70 R73 A74 Q77 R85
Binding residue
(residue number reindexed from 1)		R2 K10 K14 S54 G64 R67 A68 Q71 R79
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0019029 helical viral capsid
GO:0044423 virion component

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:3j9x, PDBe:3j9x, PDBj:3j9x
PDBsum3j9x
PubMed25999507
UniProtQ8V9P2|CAPSD_SIRV2 Major capsid protein

[Back to BioLiP]