Structure of PDB 7m4y Chain l Binding Site BS01 |
|
>7m4y Chain a (length=1528)
[Search RNA sequence]
[Download ligand structure]
[Download structure with residue number starting from 1]
[View ligand structure]
|
uaacugaagaguuugaucauggcucagauugaacgcuggcggcaggcuua acacaugcaagucgagcgggggaagguagcuugcuaccggaccuagcggc ggacgggugaguaaugcuuaggaaucugccuauuagugggggacaacauc ucgaaagggaugcuaauaccgcauacguccuacgggagaaagcaggggau cuucggaccuugcgcuaauagaugagccuaagucggauuagcuaguuggu gggguaaaggccuaccaaggcgacgaucuguagcgggucugagaggauga uccgccacacugggacugagacacggcccagacuccuacgggaggcagca guggggaauauuggacaauggggggaacccugauccagccaugccgcgug ugugaagaaggccuuaugguuguaaagcacuuuaagcgaggaggaggcua cucuaguuaauaccuagggauaguggacguuacucgcagaauaagcaccg gcuaacucugugccagcagccgcgguaauacagagggugcgagcguuaau cggauuuacugggcguaaagcgugcguaggcggcuuauuaagucggaugu gaaauccccgagcuuaacuugggaauugcauucgauacuggugagcuaga guaugggagaggaugguagaauuccagguguagcggugaaaugcguagag aucuggaggaauaccgauggcgaaggcagccaucuggccuaauacugacg cugagguacgaaagcauggggagcaaacaggauuagauacccugguaguc caugccguaaacgaugucuacuagccguuggggccuuugaggcuuuagug gcgcagcuaacgcgauaaguagaccgccuggggaguacggucgcaagacu aaaacucaaaugaauugacgggggcccgcacaagcgguggagcauguggu uuaauucgaugcaacgcgaagaaccuuaccuggccuugacauacuagaaa cuuuucagagauggauuggugccuucgggaaccuagauacaggugcugca uggcugucgucagcucgugucgugagauguuggguuaagucccgcaacga gcgcaacccuuuuccuuacuugccagcauuucggaugggaacuuuaagga uacugccagugacaaacuggaggaaggcggggacgacgucaagucaucau ggcccuuacggccagggcuacacacgugcuacaauggucgguacaaaggg uugcuacacagcgaugugaugcuaaucucaaaaagccgaucguaguccgg auuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucgcg gaucagaaugccgcggugaauacguucccgggccuuguacacaccgcccg ucacaccaugggaguuuguugcaccagaaguagcuagccuaacugcaaag agggcgguuaccacgguguggccgaugacuggggugaagucguaacaagg uagccguaggggaaccugcggcuggauc |
........<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.... .<<<.<<<..<<<..<<.<<<...<<<<<....>>>>>...>>>.>>>>> ......<<.......<<<<<<<..<<...<<<<<<<<<.<<.....<<<< <......>>>>>......>>.>.....<<<....>>>....<<<<<<..< <....>>>>>>>>>>>>>>>>..>>.>>>>>>><<<....<<<..<<<<< <<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>.. .>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>> >>>.........<<<...<<<<<....>>>>.>>>>..>>.>>>>>>..< <<<......<<<<....>>>>.....>>>>...<.<<<<<......<<<< <<<<<<.......>>>>>>.>>>>........>>>>>....>..<<<<<( ((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>> >..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<< ......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...< <<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>...... >>>>>>>>...........<<....>>.>>>>>>>..>>>.>>>>>...> >>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>> >>>>>..........<<<<<<..<<<<<<<<<<<<<...>>>>>>>>>>> >>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>> ....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<< ......<<........>>..........<<<<<<<......<<<<<<... <..<<<<....>>>>..>...<<....>>...>>>>.>>.<<<.<<<..< <<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>> >>.....<<<<.<<<<<<....<<..<<<.....>>>>>.....>>>>>> .....<<<<<.....>>>>>........>>>>.........>>>...>>> >>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<< ..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<.. ..<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<< <.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<< .<.<<<<.<<<..<<<.<<<<<<<<....<<<<<<.<<<<..<<....>> .>>>>>>>>>>...>>>>>>>>.>>>..>>>.>>>>..>.>>...>.... .<<<<<<<<<....>>>>>>>>>..... |
|
Global view | Local view | Structure summary |
[Spin on]
[Spin off]
[Reset]
[High quality]
[Low quality]
[White background]
[Black background]
|
[Spin on]
[Spin off]
[Reset]
[High quality]
[Low quality]
[White background]
[Black background]
|
PDB | 7m4y Cryo-EM Determination of Eravacycline-Bound Structures of the Ribosome and the Multidrug Efflux Pump AdeJ of Acinetobacter baumannii. |
Resolution | 2.5 Å |
Binding residue (original residue number in PDB) | N5 Q6 L7 R9 R12 T13 K18 C27 P28 Q29 R30 R31 K44 N46 S47 A48 M49 R50 K51 T58 Y66 G68 G69 E70 R83 G84 V87 K88 D89 R110 N111 Q112 S113 R114 S115 K116 A119 K120 R121 |
Binding residue (residue number reindexed from 1) | N4 Q5 L6 R8 R11 T12 K17 C26 P27 Q28 R29 R30 K43 N45 S46 A47 M48 R49 K50 T57 Y65 G67 G68 E69 R82 G83 V86 K87 D88 R109 N110 Q111 S112 R113 S114 K115 A118 K119 R120 |
|
|
Enzyme Commision number |
? |
|
|
|