Structure of PDB 6wq2 Chain k Binding Site BS01

Receptor Information
>6wq2 Chain k (length=202) Species: 176106 (Sulfolobus islandicus filamentous virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GRQSHKKIDVRNDTSTRYKGKLYGIFVNYMGEKYAQQLVENMYSNYNDVF
VEIYNKMHNALRPTLVKLAGAGATFPLWQLVNEAIYAVYLTHKETASFLV
TKYVARGVPAMTVKTLLAEVGNQLKELVPAVAEQIGSVTLDHTNVVSTVD
NIVTSMPALPNSYAGVLMKTKVPTVTPHYAGTGTFSSMESAYKALEDIER
GL
Ligand information
>6wq2 Chain 1 (length=225) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatata
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6wq2 Structures of filamentous viruses infecting hyperthermophilic archaea explain DNA stabilization in extreme environments.
Resolution4.0 Å
Binding residue
(original residue number in PDB)		I10 D11 V12 T16 R19 Y20 I27 Y48 H60 R64 G74 F77 W80 N163 Y181
Binding residue
(residue number reindexed from 1)		I8 D9 V10 T14 R17 Y18 I25 Y46 H58 R62 G72 F75 W78 N161 Y179
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0019029 helical viral capsid
GO:0044423 virion component

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:6wq2, PDBe:6wq2, PDBj:6wq2
PDBsum6wq2
PubMed32759221
UniProtQ914J4|CAPS1_SIFVH Major capsid protein 1 (Gene Name=SIFV0036)

[Back to BioLiP]