Structure of PDB 6z3m Chain j Binding Site BS01
Receptor Information
>6z3m Chain j (length=158) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PSYLFCGLFGPHLRTFKDNFQTCKVEGAWPLIDNNYLSVQVTNVPVVPGS
SATATNKITIIFKAHHGCTDQKVYQAVTDDLPAAFVDGTTSGGDSDAKSL
RIVEYVEMHARYIGTTVFVRQVGRYLTLAIRMPEDLAMSYEESQDLQLCV
NGCPLSER
Ligand information
>6z3m Chain V (length=4) Species:
9606
(Homo sapiens) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
PCNY
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6z3m
Repulsive guidance molecules lock growth differentiation factor 5 in an inhibitory complex.
Resolution
5.501 Å
Binding residue
(original residue number in PDB)
G225 C226 R274 Y275 G277 P296 D298 L299
Binding residue
(residue number reindexed from 1)
G67 C68 R111 Y112 G114 P133 D135 L136
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005515
protein binding
GO:0015026
coreceptor activity
GO:0042802
identical protein binding
Biological Process
GO:0007155
cell adhesion
GO:0007165
signal transduction
GO:0030509
BMP signaling pathway
GO:0045893
positive regulation of DNA-templated transcription
Cellular Component
GO:0005793
endoplasmic reticulum-Golgi intermediate compartment
GO:0005886
plasma membrane
GO:0045121
membrane raft
GO:0098552
side of membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6z3m
,
PDBe:6z3m
,
PDBj:6z3m
PDBsum
6z3m
PubMed
32576689
UniProt
Q6NW40
|RGMB_HUMAN Repulsive guidance molecule B (Gene Name=RGMB)
[
Back to BioLiP
]