Structure of PDB 7nhn Chain i Binding Site BS01

Receptor Information
>7nhn Chain i (length=130) Species: 169963 (Listeria monocytogenes EGD-e) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MTDPIADFLTRIRNANMVKHDKLELPASKIKKEIAEILKREGFIRDVEYI
EDDNAGTIRVFLKYGATGERVITGLKRISKPGLRVYAKSTEVPKVLNGLG
IAIVSTSQGVLTDKEARAKQVGGEVLAYVW
Ligand information
>7nhn Chain a (length=1513) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gagaguuugauccuggcucaggacgaacgcuggcggcgugccuaauacau
gcaagucgaacgaacggauguuaguggcggacgggugaguaacacguggg
caaccugccuguaaguuggggauaacuccgggaaaccggggcuaauaccg
aaugauaaaguguggcgcaugccacgcuuuugaaagaugguuucggcuau
cgcuuacagaugggcccgcggugcauuagcuaguugguaggguaauggcc
uaccaaggcaacgaugcauagccgaccugagagggugaucggccacacug
ggacugagacacggcccagacuccuacgggaggcagcaguagggaaucuu
ccgcaauggacgaaagucugacggagcaacgccgcguguaugaagaaggu
uuucggaucguaaaguacuguuguuagagaagaacaaggauaagaguaac
ugcuugucccuugacgguaucuaaccagaaagccacggcuaacuacgugc
cagcagccgcgguaauacguagguggcaagcguuguccggauuuauuggg
cguaaagcgcgcgcaggcggucuuuuaagucugaugugaaagcccccggc
uuaaccggggagggucauuggaaacuggaagacuggagugcagaagagga
gaguggaauuccacguguagcggugaaaugcguagauauguggaggaaca
ccaguggcgaaggcgacucucuggucuguaacugacgcugaggcgcgaaa
gcguggggagcaaacaggauuagauacccugguaguccacgccguaaacg
augagugcuaaguguuaggggguuuccgccccuuagugcugcagcuaacg
cauuaagcacuccgccuggggaguacgaccgcaagguugaaacucaaagg
aauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagc
aacgcgaagaaccuuaccaggucuugacauccuuugaccacucuggagac
agagcuuucccgggacaaagugacagguggugcaugguugucgucagcuc
gugucgugagauguuggguuaagucccgcaacgagcgcaacccuugauuu
uaguugccagcauuuaguugggcacucuaaagugacugccggugcaagcc
ggaggaagguggggaugacgucaaaucaucaugccccuuaugaccugggc
uacacacgugcuacaauggauaguacaaagggucgcgaagccgcgaggug
gagcuaaucccauaaaacuauucucaguucggauuguaggcugcaacucg
ccuacaugaagccggaaucgcuaguaaucguggaucagcaugccacggug
aauacguucccgggccuuguacacaccgcccgucacaccacgagaguuug
uaacacccgaagucgguaggguaaccggagccagccgccgaaggugggac
agauaauuggggugaagucguaacaagguagccguaucggaaggugcggc
uggaucaccuccu
..<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<
<<..<<<..<<.<<<<..>>>>.>>>>>......<<........<<<<<<
<..<<...<<<<<<<<<.<<.....<<<<<<....>>>>>>......>>.
>.....<<<<<<<<<<....>>>>>>>>>>.....<<<<<<....>>>>>
>>>>>>>>>..>>>>>>>>>.<<<....<<<..<<<<<<<<.......>>
>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<
<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........
<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<
<....>>>>.....>>>>...<<<<<<<.......<<<<<<<<<......
..>>>>>>>.>>.......>>>>>>...>..<<<<<(((...<<<<<...
..<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<
<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<.......<<<<<<.
....>>>>>>.....>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<
<<<<....<<<<<<<<<..<<<......>>>.....>>>>>>>>>.....
......<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....
<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>........
..<<<<<<..<<<<<<<<<<<<<....>>>>>>>>>>>>>...<<..))>
>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))
).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<....
....>>..........<<<<<<<......<<<<<<<....<<<<<....>
>>>>....<<<>>>.>>>>>.>>.<<<.<<<..<<<<<<.......<<<<
<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<
<<<..<<<..<<......>>>>>...>>>>>>>.....<<<<<....>>>
>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>..
.>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>.
..>>....>>>.....>>>>>>>......<....<<<<<<<........>
>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>.
.....>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<
<..<<<<....<.<<<<..<<<..<<>>.>>>.>>>>.>...>>>>..>>
>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>
>............
Receptor-Ligand Complex Structure
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PDB7nhn Structural basis of ABCF-mediated resistance to pleuromutilin, lincosamide, and streptogramin A antibiotics in Gram-positive pathogens.
Resolution2.9 Å
Binding residue
(original residue number in PDB)
T4 D5 D9 T12 R13 R15 N16 M19 V20 H22 K31 N56 K82 P83 G84 R86 Y88 K90 S107 T108 S109 G124 E126
Binding residue
(residue number reindexed from 1)
T2 D3 D7 T10 R11 R13 N14 M17 V18 H20 K29 N54 K80 P81 G82 R84 Y86 K88 S105 T106 S107 G122 E124
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:7nhn, PDBe:7nhn, PDBj:7nhn
PDBsum7nhn
PubMed34117249
UniProtP66623|RS8_LISMO Small ribosomal subunit protein uS8 (Gene Name=rpsH)

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