Structure of PDB 6nf8 Chain i Binding Site BS01

Receptor Information
>6nf8 Chain i (length=98) Species: 9913 (Bos taurus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LSEYALRMSRLSARLFSEVARPTDSKSMKVVKLFSEQPLAKRKETYDWYP
NHNTYFALMGILRSVGLYRDEHQDFKDEQLRLKKLRGKVKPRKGEGKR
Ligand information
>6nf8 Chain A (length=952) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
agguuuggucccagccuuccuguuaacucuuaauaaacuuacacaugcaa
gcaucuacaccccagugagaaugcccucuagguuauuaaaacuaagagga
gcuggcaucaagcacacacccuguagcucacgacgccuugcuuaaccaca
ccccacgggaaacagcagugacaaaaauuaagccauaaacgaaaguuuga
cuaaguuauauuaauuaggguugguaaaucucgugccagccaccgcgguc
auacgauuaacccaagcuaacaggaguacggcguaaaacguguuaaagca
ccauaccaaauaggguuaaauucuaacuaagcuguaaaaagccaugauua
aaauaaaaauaaaugacgaaagugacccuacaauagccgacgcacuauag
cuaagacccaaacugggauuagauaccccacuaugcuuagcccuaaacac
agauaauuacauaaacaaaauuauucgccagaguacuacuagcaacagcu
uaaaacucaaaggacuuggcggugcuuuauauccuucuagaggagccugu
ucuauaaucgauaaaccccgauaaaccucaccaauucuugcuaauacagu
cuauauaccgccaucuucagcaaacccuaaaaaggaaaaaaaguaagcgu
aauuaugauacauaaaaacguuaggucaagguguaaccuaugaaauggga
agaaaugggcuacauucucuacaccaagagaaucaagcacgaaaguuauu
augaaaccaauaaccaaaggaggauuuagcaguaaacuaagaauagagug
cuuaguugaauuaggccaugaagcacgcacacaccgcccgucacccuccu
caaauagauucagugcaucuaacccuauuuaaacgcacuagcuacaugag
aggagacaagucguaacaagguaagcauacuggaaagugugcuuggauaa
au
<<<.<.....[[.>.>>><<<<<<<.<...<<<<<<<..<.<<<.<<<..
...............<......<<<<<<<.<<<<.....>>>>.>>>>>.
>>.<<<....<<<..<<<...>>>.>>>......>>>..<.....>.>..
<<.....>>.....>>>>>>>.........<<....<<<<....>>>>..
>>...>>.>>>>>....<<<<<<<<.....(((.....((.>>>))....
...)))..>>>>>..>.>>>>>>>.....<<.((.....<<<<....<..
..........<<<<<<.......<<<.<<.<<<......>>>..>>.>>>
................<....>..>>>>>>......>....>>>>...<<
<<<<<...<<...<<<<.........>>>>...>>>>>>>>..>......
.<<<<<<<......))..>>>>>>>..>>.<<<.......<<<....>>>
.....>>>...]]...<<<<<.<<<<<<....<<..<<<<<...<<<<<<
<<......<<........>>..........<<<.<<<...........<<
.<<<...<<<<<.......<<..<<<<<....>>>.......>>..>>..
....<<.....>>..........>>>...>>.>>>>>....>>>.>>>..
.>.>>>>>>>......<<<<......>>>>.........<....<<<<<<
........>>>>>>....>.....>>>>>.....<<<<<<<.........
>>>>>>>......>>....>>>>>>>>>.>>.......<<.<...<<<<<
<.............<<....<........>....>>.............>
>>>>>....>.>>.........<<<<<<<<<....>>>>>>>>>......
..
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6nf8 Structure of Human Mitochondrial Translation Initiation Factor 3 Bound to the Small Ribosomal Subunit.
Resolution3.48 Å
Binding residue
(original residue number in PDB)		K29 K32 G63 I64 H75 F78 Q82 R89 K91 P94 R95 K96 K100 R101
Binding residue
(residue number reindexed from 1)		K26 K29 G60 I61 H72 F75 Q79 R86 K88 P91 R92 K93 K97 R98
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005763 mitochondrial small ribosomal subunit
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

View graph for
Cellular Component
External links
PDB RCSB:6nf8, PDBe:6nf8, PDBj:6nf8
PDBsum6nf8
PubMed30677741
UniProtP82926|RT33_BOVIN Small ribosomal subunit protein mS33 (Gene Name=MRPS33)

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