Structure of PDB 8bh7 Chain g Binding Site BS01

Receptor Information
>8bh7 Chain g (length=147) Species: 93061 (Staphylococcus aureus subsp. aureus NCTC 8325) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VPKRDVLPDPIHNSKLVTKLINKIMLDGKRGTAQRILYSAFDLVEQRSGR
DALEVFEEAINNIMPVLEVKARRSNYQVPVEVRPERRTTLGLRWLVNYAR
LRGEKTMEDRLANEILDAANNTGGAVKKREDTHKMAEANKAFAHYRW
Ligand information
>8bh7 Chain a (length=1541) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggagaguuugauccuggcucaggaugaacgcuggcggcgugccuaauaca
ugcaagucgagcgaacggacgagaagcuugcuucucugauguuagcggcg
gacgggugaguaacacguggauaaccuaccuauaagacugggauaacuuc
gggaaaccguagcuaauaccggauaauauuuugaaccgcaugguucaaaa
gugaaagacggucuugcugucacuuauagauggauccgcgcugcauuagc
uaguugguaagguaacggcuuaccaaggcaacgaugcauagccgaccuga
gagggugaucggccacacuggaacugagacacgguccagacuccuacggg
aggcagcaguagggaaucuuccgcaaugggcgaaagccugacggagcaac
gccgcgugagugaugaaggucuucggaucguaaaacucuguuauuaggga
agaacauauguguaaguaacugugcacaucuugacgguaccuaaucagaa
agccacggcuaacuacgugccagcagccgcgguaauacguagguggcaag
cguuauccggaauuauugggcguaaagcgcgcguaggcgguuuuuuaagu
cugaugugaaagcccacggcucaaccguggagggucauuggaaacuggaa
aacuugagugcagaagaggaaaguggaauuccauguguagcggugaaaug
cgcagagauauggaggaacaccaguggcgaaggcgacuuucuggucugua
acugacgcugaugugcgaaagcguggggaucaaacaggauuagauacccu
gguaguccacgccguaaacgaugagugcuaaguguuaggggguuucccgc
cccuuagugcugcagcuaacgcauuaagcacuccgccuggggaguacgac
cgcaagguugaaacucaaaggaauugacggggacccgcacaagcggugga
gcaugugguuuaauucgaagcaacgcgaagaaccuuaccaaaucuugaca
uccuuugacaacucuagagauagagccuuccccuucgggggacaaaguga
cagguggugcaugguugucgucagcucgugucgugagauguuggguuaag
ucccgcaacgagcgcaacccuuaagcuuaguugccaucauuaaguugggc
acucuaaguugacugccggugacaaaccggaggaagguggggaugacguc
aaaucaucaugccccuuaugauuugggcuacacacgugcuacaauggaca
auacaaagggcagcgaaaccgcgaggucaagcaaaucccauaaaguuguu
cucaguucggauuguagucugcaacucgacuacaugaagcuggaaucgcu
aguaaucguagaucagcaugcuacggugaauacguucccgggucuuguac
acaccgcccgucacaccacgagaguuuguaacacccgaagccgguggagu
aaccuuuuaggagcuagccgucgaaggugggacaaaugauuggggugaag
ucguaacaagguagccguaucggaaggugcggcuggaucac
...<<<<....((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.
<<<..<<<....<..<.....<<.......>>........>.>...>>>.
.....<<........<<<<<<<..<<...<<<<<<<.<<<<.....<<.<
<<....>>>.>>......>>>>......<<<<<<<<<....>>>>>>>>>
......<<<<.......>>>>.>>>>>>>..>>>>>>>>>.<<<....<<
...<<<<<<<<.......>>>>>>>>.>>......>>>..<<<<<<<<..
..>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>
>>...>>>>>>.........<<<.....<<......>>...>>>..>>.>
>>>>>..<<<<........<<....>>.......>>>>....<<<<<<..
..........<..............>.............>>>>>>.....
.<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>
>>>>>>>>..........<<<.......<<<<<..<...<<<<<<<.<<<
<.<<<<.......<<<<<<.....>>>>>>.....>>>>.>>..>>>>>>
>>>....<..<<<<...<<<<<<<....<<<<<<<<...<<........>
>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>..
.>......>..>>>>>....<<<<<<<...<...<<<...........>>
>...>>>>>>>>..........<<<<<<..<<.<<<<<<<<<.......>
>>>>>>>>.>>...<<....>>.....>>>>>>.>>>.<<<.......<<
<....>>>.....>>>..))))...<.....<<<<<<....<<<<....<
<<<<<<<<.......<<........>>..........<<<<<<<......
<.<<.......<<<<<....>>>>>....................>>.>.
..<...<....<<<<<.......<<<<<<............<<<<.....
.>>>>..>>>>>>.....<<<..<<<<<<...<<<..<........>>>.
.>>..>>>>>.....<<<<.......>>>>.........>>>........
.>>>...>>..>.>.....>>>>>>>....>.>>>>>>>>.....<<..<
.......<<<..<<...<<<....>>>...>>....>>>.......>..>
>............<<<<<<........>>>>>>.............>>>>
.....<<<<<<.........>>>>>>............>>>>>>......
.........<.....<..<<.....<.<<...<<<......<<<<..<<<
..<<<...>>>.>>>.>>>>.....>>>...>>>......>>..>.....
>............<<<<<<<<....>>>>>>>>....>...
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8bh7 Ribosome maturation factor P (RimP) from Staphylococcus aureus
Resolution4.23 Å
Binding residue
(original residue number in PDB)		V7 K9 D11 N28 K29 M31 D33 G34 K35 R36 G37 T38 R41 I42 K76 A77 R78 R79 R92 E94 R95 T98 L99 R102 R109 G112 K114 T115 M116 R119 W156
Binding residue
(residue number reindexed from 1)		V1 K3 D5 N22 K23 M25 D27 G28 K29 R30 G31 T32 R35 I36 K70 A71 R72 R73 R83 E85 R86 T89 L90 R93 R100 G103 K105 T106 M107 R110 W147
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8bh7, PDBe:8bh7, PDBj:8bh7
PDBsum8bh7
PubMed
UniProtP48940|RS7_STAA8 Small ribosomal subunit protein uS7 (Gene Name=rpsG)

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