Structure of PDB 6ypu Chain g Binding Site BS01

Receptor Information
>6ypu Chain g (length=103) Species: 575584 (Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYP
INKIHKAHYILMNVECGQSTLDELEELFRYNDAIIRNLIIRREHAITEES
LLA
Ligand information
>6ypu Chain 2 (length=894) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaacugaagaguuugaucauggcucagauugaacgcuggcggcaggcuua
acacaugcaagucgagcgggggaagcggaccuagcggcggacgggugagu
aaugcuuaggaaucugccuauuagugggggacaacaucucgaaagggaug
cuaauaccgcauacguccuacgggagaaagcagggccuugcgcuaauaga
ugagccuaagucggauuagcuaguuggugggguaaaggccuaccaaggcg
acgaucuguagcgggucugagaggaugauccgccacacugggacugagac
acggcccagacuccuacgggaggcagcaguggggaauauuggacaauggg
gggaacccugauccagccaugccgcgugugugaagaaggccuuaugguug
uaaagcacuuuaagcgaggaggaggcuacuuuaguuaauaccuagagaua
guggacguuacucgcagaauaagcaccggcuaacucugugccagcagccg
cgguaauacagagggugcgagcguuaaucggauuuacugggcguaaagcg
ugcguaggcggcuuauuaagucggaugugaaauccccgagcuuaacuugg
gaauugcauucgauacuggugagcuagaguaugggagaggaugguagaau
uccagguguagcggugaaaugcguagagaucuggaggaauaccgauggcg
aaggcagccaucuggccuaauacugacgcugagguacgaaagcaugggga
gcaaacaggauuagauacccugguaguccaugccguaaacgaugucuacu
agccguuggggccggcuuuaguggcgcagcuaacgcgauaaguagaccgc
cuggggaguacggucgcaagacuaaaacucaaaugaauugacgg
........<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<....
.<<<.<<<..<<<..<<.<<<........>>>.>>>>>......<<....
...<<<<<<<..<<...<<<<<<<<<.<<.....<<<<<......>>>>>
......>>.>.....<<<....>>>....<<<<<..>>>>>>>>>>>>>.
.>>.>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>.
.....>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<......
...>>>>>>.<<<<....>>>>...>>>>>>.........<<<...<<<<
<....>>>>.>>>>..>>.>>>>>>..<<<<......<<<<....>>>>.
....>>>>.....<<<<<......<<<<<<<<<<.......>>>>>>.>>
>>........>>>>>.......<<<<<(((...<<<<<.....<<.)))>
>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<
<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>
>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<
<<<<<<<...<<<......>>>......>>>>>>>>...........<<.
...>>.>>>>>>>..>>>.>>>>>...>>>...>>>>....<<<<<<...
<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<.
.<<<<<<<<<<<<>>>>>>>>>>>>...<<..))>>.....>>>>>>.>>
>.<<<......<<<<....>>>>....>>>..)))).]......
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6ypu Structure of the 70S Ribosome from the Human Pathogen Acinetobacter baumannii in Complex with Clinically Relevant Antibiotics.
Resolution2.9 Å
Binding residue
(original residue number in PDB)		R2 Y4 K53 R79 R86 I89 I90 R91
Binding residue
(residue number reindexed from 1)		R2 Y4 K53 R79 R86 I89 I90 R91
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0070181 small ribosomal subunit rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6ypu, PDBe:6ypu, PDBj:6ypu
PDBsum6ypu
PubMed32857965
UniProtD0C5Z0

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