Structure of PDB 6a5u Chain g Binding Site BS01
Receptor Information
>6a5u Chain g (length=105) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
AKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEIL
ELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQA
VLLPK
Ligand information
>6a5u Chain 0 (length=40) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ggattacacccaagacaccaggcacgagacagaaaaaaac
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6a5u
Structural basis of the nucleosome transition during RNA polymerase II passage.
Resolution
7.6 Å
Binding residue
(original residue number in PDB)
R42 V43 K75 T76 R77
Binding residue
(residue number reindexed from 1)
R29 V30 K62 T63 R64
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0005515
protein binding
GO:0030527
structural constituent of chromatin
GO:0031492
nucleosomal DNA binding
GO:0046982
protein heterodimerization activity
Biological Process
GO:0006325
chromatin organization
GO:0008285
negative regulation of cell population proliferation
GO:0031507
heterochromatin formation
GO:0061644
protein localization to CENP-A containing chromatin
Cellular Component
GO:0000786
nucleosome
GO:0005634
nucleus
GO:0005694
chromosome
GO:0043505
CENP-A containing nucleosome
GO:0070062
extracellular exosome
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6a5u
,
PDBe:6a5u
,
PDBj:6a5u
PDBsum
6a5u
PubMed
30287617
UniProt
P04908
|H2A1B_HUMAN Histone H2A type 1-B/E (Gene Name=H2AC4)
[
Back to BioLiP
]