Structure of PDB 8ro1 Chain f Binding Site BS01

Receptor Information
>8ro1 Chain f (length=72) Species: 6239 (Caenorhabditis elegans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QPVNPKPFLNSLTGKFVVCKLKWGMEYKGVLVAVDSYMNLQLAHAEEYID
GNSQGNLGEILIRCNNVLYVGG
Ligand information
>8ro1 Chain 5 (length=111) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
acucugguuccucugcauuuaaccgugaaaaucuuucgccuuuuacuaaa
gauuuccgugcaaaggagcauacauugaguaaauuuuuggaguccccucg
agagagcggga
......<<<<<<.<<<<...........<<<<<<<<...........>>>
>>>>>...>>>>.>>>>>>.......................<<<<<<<.
...>>>.>>>>
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8ro1 Mechanism for the initiation of spliceosome disassembly.
Resolution3.0 Å
Binding residue
(original residue number in PDB)
K26 W27 S40 Y41 R67 N69
Binding residue
(residue number reindexed from 1)
K22 W23 S36 Y37 R63 N65
External links
PDB RCSB:8ro1, PDBe:8ro1, PDBj:8ro1
PDBsum8ro1
PubMed38925148
UniProtP34659|RUXF_CAEEL Probable small nuclear ribonucleoprotein F (Gene Name=snr-5)

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