Structure of PDB 8r57 Chain f Binding Site BS01

Receptor Information
>8r57 Chain f (length=64) Species: 4565 (Triticum aestivum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PKKQKHKHKKVKLAVLQFYKVDDATGKVTRLRKECPNADCGAGTFMANHF
DRHYCGKCGLTYVY
Ligand information
>8r57 Chain A (length=458) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggcaccaccaggcguggagccugcggcuuaauuugacucaacacggggaa
acuuaccagguccagacauagcaaggauugacagacugagagcucuuucu
ugauucuaugggugguggugcauggccguucuuaguugguuaauuccguu
aacgaacgagaccucagccugcuaacuagcuaugcggagccaucccuccg
cagcuagcuucuuagagggacuaucgccguuuaggcgacggaaguuugag
gcaauaacaggucugugaugcccuuagauguucugggccgcacgcgcgcu
acacugauguauucaacgaguauauagccuuggccgacaggcccggguaa
ucuugggaaauuucaucgugauggggauagaucauugcaauuguuggucu
ucaacgaggaaugccuaguaagcgcgagucaucagcucgcguugacuacg
ucccugcc
<<<<..<<.<<<<<<..<<<.<<<<<.......<<........>>.....
.....<<<<<......<<<<<........<<.<<<........>>>.>>.
.....>>>>>...<<.<<<..<<<<<<<<<....<<<<<......>>>..
.....>>....<<<<<.<<..<<<<..<<<<.<<<<<<<......>>>>>
>>...>>>>..>>>>.>>.....<<<<<.....>>>>>........>>>>
>....>>>.>>>...>.>>>>>>>.......>>>>>....>.>>>>.>>>
.....<<<<.<.......<<.......<<<.<<<<....>>>>.>>>...
.>>........>.>>>>...........<<<<<<..........>>>>>>
..........>>>>>>....<<<<<<<<.......>>>>>>>>......>
>...>>>>
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8r57 High-Resolution Structure and Internal Mobility of a Plant 40S Ribosomal Subunit.
Resolution2.55 Å
Binding residue
(original residue number in PDB)		P12 K13 K14 Q15 H17 H19 K20 K21 L24 F29 R43 F56 A58 N59 H60 R63 Y65 G67 K68 T72
Binding residue
(residue number reindexed from 1)		P1 K2 K3 Q4 H6 H8 K9 K10 L13 F18 R32 F45 A47 N48 H49 R52 Y54 G56 K57 T61
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
GO:0031386 protein tag activity
GO:0031625 ubiquitin protein ligase binding
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
GO:0016567 protein ubiquitination
GO:0019941 modification-dependent protein catabolic process
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8r57, PDBe:8r57, PDBj:8r57
PDBsum8r57
PubMed38139282
UniProtW5A9E1

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