Structure of PDB 8he5 Chain e Binding Site BS01

Receptor Information
>8he5 Chain e (length=97) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSA
VMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Ligand information
>8he5 Chain N (length=142) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gtggccgttttctgtctcgtgcctggtgtcttgggtgtaatccccttggc
ggttaaaacgcgggggacagcgcgtacgtgcgtttaagcggtgctagagc
tgtctacgaccaattgagcggcctcggcaccgggattctgat
Receptor-Ligand Complex Structure
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PDB8he5 Structural Basis of Damaged Nucleotide Recognition by Transcribing RNA Polymerase II in the Nucleosome.
Resolution6.95 Å
Binding residue
(original residue number in PDB)		H39 R40 Y41 R42 T45 R63 Q68 R72 R83 F84 Q85 S86 V117 T118 M120
Binding residue
(residue number reindexed from 1)		H1 R2 Y3 R4 T7 R25 Q30 R34 R45 F46 Q47 S48 V79 T80 M82
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0045296 cadherin binding
GO:0046982 protein heterodimerization activity
Biological Process
GO:0006325 chromatin organization
GO:0006334 nucleosome assembly
GO:0010467 gene expression
GO:0032200 telomere organization
GO:0040029 epigenetic regulation of gene expression
Cellular Component
GO:0000786 nucleosome
GO:0005576 extracellular region
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome
GO:0016020 membrane
GO:0032991 protein-containing complex
GO:0070062 extracellular exosome

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8he5, PDBe:8he5, PDBj:8he5
PDBsum8he5
PubMed37120012
UniProtP68431|H31_HUMAN Histone H3.1 (Gene Name=H3C1)

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