Structure of PDB 5mre Chain dd Binding Site BS01

Receptor Information
>5mre Chain dd (length=151) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
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A
Ligand information
>5mre Chain aa (length=1501) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaagaauaugauguugguucagauuaagcgcuaaauaaggacaugacaca
ugcgaaucauacguuuauuauugagauaauaaauaugugguguaaacgug
aguaauuuuauuaggaauuaaugaacuauagaauaagcuaaauacuuaau
auuauauaaaaaauuuauauaauaaaaaggauauauauauauauauuuau
cuauagucaagccaauaaugguuuagguaguagguuuauuaagaguuaaa
ccuagccaacgauccauaaucgauaaugaaaguuagaacgaucacguuga
cucugaaauauagucaauaucuauaagauacagcagugaggaauauugga
caaugaucgaaagauugauccaguuacuuauuaggaugauauauauauau
auauaaauugauuaaaaauaaaauccauaaauaauuaaaauaaugauauu
aauuaccauauauuuauauggauauauauauauuuuaauaguccugacua
auauuugugccagcagucgcgguaacacaaagagggcgagcguuaaucau
aaugguuuaaaggauccguagaaugaauuauauauaauuuagaguuaaua
aaauuaauuaaagaauuauaauaguaaagaugaaauaauaauaauaauua
uaagacuaauauaugugaaaauauuaauuaaauauuaacugacauugagg
gauuaaaacuagaguagcgaaacggauucgauacccguguaguucuagua
guaaacuaugaauacaauuauuuauaauauauauauaaauaauaaaugaa
aaugaaaguauuccaccugaagaguacguuagcaauaaugaaacucaaaa
caauagacgguuacagacuuaagcaguggagcauguuauuuaauucgaua
auccacgacuaaccuuaccauauuuugaauauuauaauaauuauaauuau
uauauuacaggcguuacauuguugucuuuaguucgugcugcaaaguuuua
gauuaaguucauaaacgaacaaaacuccauauauauaauuuuaauuauau
auaauuuuauauuauuuaauauaaagaaaggaauuaagacaaaucauaau
gauccuuauaauauggguaauagacgugcuauaauaaaaugauaauaaaa
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auuuuuaauauauuuuuuuauuauaaauaugaauuauaaucugaaauucg
auuauaugaaaaaagaauugcuaguaauacguaaauuaguauguuacggu
gaauauucuaacuguuucgcacuaaucacucaucacgcguugaaacauau
uauuaucuuauuauuuauauaauauuuuuuaauaaauauuauuaauuuau
auuuauuuauaucagaaauaauaugaauuaaugcgaaguugaaauacagu
uaccguaggggaaccugcggugggcuuauaaauaucuuaaauauucuuac
a
...<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<......<<<.
<<<..<<<..<<<<<<<<<<<<..>>>>>>>>>>..>>>>>.....<<<.
.......<<<<<.<<.........<<<<<<<<.<<<<.......>>>>..
.<<<<<<<<<...>>>>>>>>>......<<<<<<<<<..>>>>>>>>>.>
>>>>>>>....>>>>>>><<<....<<<..<<<<<<<<........>>>>
>>>>>>>......>>>..<<<<.<<<<....>>>>...>>>>.>>><<<<
<<.........>>>>>><<<<.....>>>>..>>>>>>.........<<<
....<<<<....>>>>..>>>...>.>>>>>>.<<<<..<<<<<<....>
>>>>>..<<......>>.....>>>>..<<<<<<<<..............
>>>>><<<<<<<..>>>>>>><<<<<..>>>>>>>>....<<<<<(((..
...<<<<.....<<.)))>>.......>>>>.>>>>>..>>>>>>>>>..
...<<<((.....<<<<...<.<<.<<<<<<..>>>>>>...<<<<<<<<
...<<<<<<<<<<..<<<<<<<........................>>>>
>>>..>>.......<<....>>.>>>>>>>>.>>>>>>>>...>>>...>
>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>.
.........<<<<<<.<<<<<<<<<<.<..>..>>>>>>>>>>..<<..)
)>>....>>>>>>.>>>.<<.......<<<<....>>>>.....>>..))
)).]<<.<<...<<<<.....<<<<<<..<<<<<<<<<<......<<...
.....>>..........<<<<<<<.....<<.<<<<<<<<<<..>>>>>>
>>>>.>>.<<<.<<<..<<<<<<<<<....<<<<<<<<<....>>>....
<<......>>....>>>>>>.....<<<.<<<<<<<<........>>>>>
>>>..<<<<<<<<<..>>>>>>>>>....>>>.....>>>.>>>...>>>
>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<........<
<<..<<..<<<<<<......>>>>>>..>>....>>>......>>>>>>.
.....<<<<<........>>>>>......<....<<<<<<<........>
>>>>>>....>.....>>>>>>....<<.<<<<<.........>>>>>>>
...........>>>>..>>..>>....<.<<<.<.<<<<<<<<..<<<<<
<<<<.<<<...<<<..<<<.<<<<<...<<<<<<<...>>>>>>>...>>
>>>>>>..>>>..>>>>>>>>>>>>..>>>>>>>>..>.>>>..>.....
<<<<<<<<<....>>>>>>>>>............................
.
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5mre The structure of the yeast mitochondrial ribosome.
Resolution3.75 Å
Binding residue
(original residue number in PDB)
X25 X26 X29 X60 X61 X265
Binding residue
(residue number reindexed from 1)
X17 X18 X21 X50 X51 X136
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