Structure of PDB 8ro2 Chain d Binding Site BS01

Receptor Information
>8ro2 Chain d (length=96) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVL
ENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNP
Ligand information
>8ro2 Chain 5 (length=92) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
guuucucuucagaucgcauaaaucuuucgccuuuuacuaaagauuuccgu
ggagaggaacaccaauuuuuugagccuugccuuggcaaggcu
<<<<<<<<<<<........<<<<<<<<.<.......>.>>>>>>>>...>
>>>>>>>>>>............<<<<<<<<....>>>>>>>>
Receptor-Ligand Complex Structure
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PDB8ro2 Mechanism for the initiation of spliceosome disassembly.
Resolution3.5 Å
Binding residue
(original residue number in PDB)
R47 H62 N64 K79 K86 D104
Binding residue
(residue number reindexed from 1)
R30 H45 N47 K62 K69 D87
External links
PDB RCSB:8ro2, PDBe:8ro2, PDBj:8ro2
PDBsum8ro2
PubMed38925148
UniProtP62316|SMD2_HUMAN Small nuclear ribonucleoprotein Sm D2 (Gene Name=SNRPD2)

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