Structure of PDB 8ro1 Chain d Binding Site BS01

Receptor Information
>8ro1 Chain d (length=94) Species: 6239 (Caenorhabditis elegans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AEELAAKEDEEFNVGPLSILTNSVKNNHQVLINCRNNKKLLGRVKAFDRH
CNMVLENVKEMWTESVAKDRFISKMFLRGDSVILVVKNPLAQAE
Ligand information
>8ro1 Chain 5 (length=111) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
acucugguuccucugcauuuaaccgugaaaaucuuucgccuuuuacuaaa
gauuuccgugcaaaggagcauacauugaguaaauuuuuggaguccccucg
agagagcggga
......<<<<<<.<<<<...........<<<<<<<<...........>>>
>>>>>...>>>>.>>>>>>.......................<<<<<<<.
...>>>.>>>>
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8ro1 Mechanism for the initiation of spliceosome disassembly.
Resolution3.0 Å
Binding residue
(original residue number in PDB)		R47 R61 H62 N64 R102 D104
Binding residue
(residue number reindexed from 1)		R35 R49 H50 N52 R78 D80
External links
PDB RCSB:8ro1, PDBe:8ro1, PDBj:8ro1
PDBsum8ro1
PubMed38925148
UniProtQ18786|SMD2_CAEEL Probable small nuclear ribonucleoprotein Sm D2 (Gene Name=snr-4)

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