Structure of PDB 8k25 Chain d Binding Site BS01

Receptor Information

>8k25 Chain d (length=289) Species: 979527 (Vibrio phage ICP1_2004_A) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

MQKQILTSQKRNMYILSRCKVLVKNGQVCHLHEDGNVYTVPYANTVFIGL
AEGTSITNEAMSMLAANGVIVFWTKAADIICHLPQADYRPTKYMQNWVRL
WLDEEKKLSAAKEILKMRVDSLSTHVHDFGVDVENKRVSSIVNKFDKGVT
QATSFESLLGHEGTFVKSLYKEYALEYEIEFKRDHKSADNYNKFLTLGNY
YAYGIARSSLWALGIDNSFPLLHGSTRRGGLVFDVADIIKTSIILPLAFH
AADQGMSNTEFKRSCVAYFDKNDILAYLINNIKRLCMEN

Ligand information

>8k25 Chain U (length=17) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

caatttaaatagggaag

Receptor-Ligand Complex Structure

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Structure summary

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PDB	8k25 Structure of Cas1-Cas2 complex bound dsDNA
Resolution	3.4 Å
Binding residue (original residue number in PDB)	G35 V37
Binding residue (residue number reindexed from 1)	G35 V37

Gene Ontology

	Molecular Function
GO:0003677	DNA binding
GO:0004519	endonuclease activity
GO:0046872	metal ion binding

	Biological Process
GO:0051607	defense response to virus

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Molecular Function

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Biological Process

External links

PDB	RCSB:8k25, PDBe:8k25, PDBj:8k25
PDBsum	8k25
PubMed
UniProt	F1D5W0

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