Structure of PDB 8bz1 Chain d Binding Site BS01

Receptor Information
>8bz1 Chain d (length=97) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RRKSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEAS
RLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Ligand information
>8bz1 Chain N (length=198) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gaaggggggctataaaagggggtgggggcgcgttcgtcctcactctcttc
cgatcgagaatcccggtgccgaggccgctcaattggtcgtagacagctct
agcaccgcttaaacgcacgtacgcgctgtcccccgcgttttaaccgccaa
ggggattactccctagtctccaggcacgtgtcagatatatacatccga
Receptor-Ligand Complex Structure
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PDB8bz1 Structural basis of transcription reduction by a promoter-proximal +1 nucleosome.
Resolution3.8 Å
Binding residue
(original residue number in PDB)		Y43 G54 I55 S56 S57 R87 S88 T89
Binding residue
(residue number reindexed from 1)		Y14 G25 I26 S27 S28 R58 S59 T60
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:8bz1, PDBe:8bz1, PDBj:8bz1
PDBsum8bz1
PubMed37148879
UniProtP02281|H2B11_XENLA Histone H2B 1.1

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