Structure of PDB 7zeb Chain d Binding Site BS01
Receptor Information
>7zeb Chain d (length=331) Species:
9940
(Ovis aries) [
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LHHAVIPHGKGGRSSVSGIVATVFGATGFLGRYLVNHLGRMGSQVIVPYR
CEPYDTMHLRPMGDLGQIIFMDWNGRDKDSIRRAVEHSNVVINLVGREWE
TKNFDFEDVFVKIPQAIAQVSKEAGVEKFIHISHLNADIKSSSKYLRNKA
VGEKEVRETFPEATIIKPADIFGREDRFLNYFANIRWFGGVPLISLGKKT
VKQPVYIVDVTKGIINAIKDPDARGKTFAFVGPNRYLLFDLVQYVFAVAH
RPFLPYPGRLFEISPFEPWTTRDKVERIHTTDRTLPHLPGLEDLGVQATP
LELKAIEVLRRHRTYRWLSSEIEDVQPAKTV
Ligand information
Ligand ID
NDP
InChI
InChI=1S/C21H30N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1,3-4,7-8,10-11,13-16,20-21,29-31H,2,5-6H2,(H2,23,32)(H,36,37)(H,38,39)(H2,22,24,25)(H2,33,34,35)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
ACFIXJIJDZMPPO-NNYOXOHSSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)O[P@@](=O)(O)OC[C@@H]4[C@H]([C@H]([C@@H](O4)N5C=CCC(=C5)C(=O)N)O)O)O)OP(=O)(O)O)N
CACTVS 3.341
NC(=O)C1=CN(C=CC1)[CH]2O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O[P](O)(O)=O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
CACTVS 3.341
NC(=O)C1=CN(C=CC1)[C@@H]2O[C@H](CO[P@@](O)(=O)O[P@](O)(=O)OC[C@H]3O[C@H]([C@H](O[P](O)(O)=O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OCC4C(C(C(O4)N5C=CCC(=C5)C(=O)N)O)O)O)OP(=O)(O)O)N
Formula
C21 H30 N7 O17 P3
Name
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
ChEMBL
CHEMBL407009
DrugBank
DB02338
ZINC
ZINC000008215411
PDB chain
7zeb Chain d Residue 402 [
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Receptor-Ligand Complex Structure
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PDB
7zeb
A universal coupling mechanism of respiratory complex I.
Resolution
3.8 Å
Binding residue
(original residue number in PDB)
G25 T27 G28 F29 R50 C51 W73 L94 V95 G96 R97 F104 I132 H134 Y145 K149 I171
Binding residue
(residue number reindexed from 1)
G25 T27 G28 F29 R50 C51 W73 L94 V95 G96 R97 F104 I132 H134 Y145 K149 I171
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:7zeb
,
PDBe:7zeb
,
PDBj:7zeb
PDBsum
7zeb
PubMed
36104567
UniProt
A0A6P3E3I5
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