Structure of PDB 6ymy Chain d Binding Site BS01

Receptor Information
>6ymy Chain d (length=117) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VVKTAQNLAEVNGPETLIGPGAKEGTVPTDLDQETGLARLELLGKLEGID
VFDTKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPAGSHTIMWLKPTVN
EVARCWECGSVYKLNPV
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6ymy Chain d Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6ymy Respiratory supercomplexes enhance electron transport by decreasing cytochrome c diffusion distance.
Resolution3.41 Å
Binding residue
(original residue number in PDB)		C111 H119
Binding residue
(residue number reindexed from 1)		C82 H90
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
Cellular Component
GO:0005740 mitochondrial envelope
GO:0045277 respiratory chain complex IV

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Biological Process
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Cellular Component
External links
PDB RCSB:6ymy, PDBe:6ymy, PDBj:6ymy
PDBsum6ymy
PubMed33016568
UniProtP04037|COX4_YEAST Cytochrome c oxidase subunit 4, mitochondrial (Gene Name=COX4)

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