Structure of PDB 5t61 Chain d Binding Site BS01
Receptor Information
>5t61 Chain d (length=340) Species:
145261
(Methanothermobacter wolfeii) [
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IEGKNITVERTNRRLIFQDCLCAVCGLCGEICPVSAIEVNPTGAMVRTEQ
EKSKIAIDENKCVLCGMCSSICPFQALDLQIDGTSIKELAEYPKIIKSAE
IDDETCIQCKACETACPQDAITITRELPERKDLVTGEIEIDKDTCIYCGM
CEEMCPVDAIEIDHQTPSSASPVVATDIRVDEDKCVHCGICKRICPVDAI
MQVCRICPYGEYEIKTPEVTGTSYIDPELCVNCGWCQEICPVDAATVTKP
FEGELIIDQDTCQACETCVMVCPCNVLSFPKPEKPGEKTTKLHKDERFCI
YCGACERSCPVTAITVKRNRINTTPIRSKAWKNAFDSLLK
Ligand information
Ligand ID
SF4
InChI
InChI=1S/4Fe.4S
InChIKey
LJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385
S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
Formula
Fe4 S4
Name
IRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain
5t61 Chain d Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
5t61
The methanogenic CO2 reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters.
Resolution
2.55 Å
Binding residue
(original residue number in PDB)
C281 V285 C308 I309 Y310 C311 G312 C314
Binding residue
(residue number reindexed from 1)
C272 V276 C299 I300 Y301 C302 G303 C305
Annotation score
4
External links
PDB
RCSB:5t61
,
PDBe:5t61
,
PDBj:5t61
PDBsum
5t61
PubMed
27846502
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